Return to main results Retrieve Phyre Job Id

Job DescriptionP39369
Confidence5.94%DateThu Jan 5 12:00:01 GMT 2012
Rank88Aligned Residues96
% Identity15%Templatec3nklA_
PDB info PDB header:oxidoreductase/lyaseChain: A: PDB Molecule:udp-d-quinovosamine 4-dehydrogenase; PDBTitle: crystal structure of udp-d-quinovosamine 4-dehydrogenase from vibrio2 fischeri
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140.........150.........160.........170.........180.........190.........200.....
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  AKDSFLVFGDMDLIEMQPAFSPRGLLAKYLFSSDNNALQFEFQKRQDLISAHTQISTLHGVEQHDEFLNKTLAGAQKKIT
Query Conservation 

    
 
                
   
                           
 
  

   
  

  

  
 
Alig confidence 








.........



















































...






Template Conservation 
   




......... 
  
  
   
       


  
              
     
      ...  

 

Template Sequence  AKKKVLIYG. . . . . . . . . AGSAGLQLANXLRQGKEFHPIAFIDDDRKKHKTTXQGITIYRPKYLERLIKK. . . HCISTVL
Template Known Secondary structure 


.........
SSSS
S
GGGTT
TT
GGG...T

Template Predicted Secondary structure 




.........



















...



Template SS confidence 















































































   0........ .10.........20.........30.........40.........50.........60 .......
 
   206...210.........220.........230........
Predicted Secondary structure 












Query SS confidence 
































Query Sequence  IISPWLSWQKVEQTGFLASMALARSRGIDITVV
Query Conservation 





    
    
  

  
  


 
 

Alig confidence 





.....





















Template Conservation 

    .....       

       
 
  
Template Sequence  LAVPSA. . . . . SQVQKKVIIESLAKLHVEVLTI
Template Known Secondary structure 

TTS.....
TTT

Template Predicted Secondary structure 



.....





Template SS confidence 
































   68.70... ......80.........90.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions