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Job DescriptionP39369
Confidence99.23%DateThu Jan 5 12:00:01 GMT 2012
Rank14Aligned Residues102
% Identity12%Templatec3dmnA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative dna helicase; PDBTitle: the crystal structure of the c-terminal domain of a possilbe dna2 helicase from lactobacillus plantarun wcfs1
Resolution1.66 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70... ......80.........90.....
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Query Sequence  LEAETIAAWLVAHKDDIERHYGEPLYKVVGVVTPFSAQVNAIKMSLRKLEIN. . . . . . GKDEQGLLTVGTVHSLQGAERA
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Template Sequence  AGVDQVVDQLAXNDSERDT. . . . . . . . . TAIIGKSLAECEALTKALKARGEQVTLIQTENRLAPGVIVVPSFLAKGLEFD
Template Known Secondary structure  TT

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SSGGG
TT

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   638.640.........650...... ...660.........670.........680.........690.........700........
 
   96...100.........110.........120.........130.....
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Query Sequence  IVLFSPVYSKHEDGRFLDSNSTILNVAVSRAKDSFLVFGD
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Template Sequence  AVIVWNA. . . NQENYQREDERQLLYTICSRAXHELTLVAV
Template Known Secondary structure  T
...BTTTS
SGGGTT
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   710...... ...720.........730.........740......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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