Job Description P39369 Confidence 100.00% Date Thu Jan 5 12:00:01 GMT 2012 Rank 2 Aligned Residues 135 % Identity 23% Template c2xzlA_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent helicase nam7; PDBTitle: upf1-rna complex Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		Y	L	H	I	D	G	R	G	M	K	P	N	.	G	G	S	R	H	N	P	L	E	A	E	T	I	A	A	W	L	V	A	H	K	D	D	I	E	R	H	Y	G	E	P	L	Y	K	V	V	G	V	V	T	P	F	S	A	Q	V	N	A	I	K	M	S	L	R	K	L	E	I	N	G	K	D	E	Q	G	L	L
Query Conservation														.
Alig confidence														.																											.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.
Template Sequence		F	W	A	N	Y	G	R	E	E	I	S	A	N	G	T	S	F	L	N	R	I	E	A	M	N	C	E	R	I	I	T	K	L	F	R	D	G	V	K	.	.	.	.	.	.	P	E	Q	I	G	V	I	T	P	Y	E	G	Q	R	A	Y	I	L	Q	Y	M	Q	M	N	G	S	L	D	K	D	L	Y	I	K	V
Template Known Secondary structure													T	T	S	S	S																				T	T			.	.	.	.	.	.	G	G	G						S																	S	S							T	S
Template Predicted Secondary structure																																									.	.	.	.	.	.
Template SS confidence
		684	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.							.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	G	T	V	H	S	L	Q	G	A	E	R	A	I	V	L	F	S	P	V	Y	S	K	H	E	D	G	R	F	L	D	S	N	S	T	I	L	N	V	A	V	S	R	A	K	D	S	F	L	V	F	G	D	M	D	L	I	E	M	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	A	S	V	D	A	F	Q	G	R	E	K	D	Y	I	I	L	S	C	V	R	A	N	E	Q	Q	A	I	G	F	L	R	D	P	R	R	L	N	V	G	L	T	R	A	K	Y	G	L	V	I	L	G	N	P	R	S	L	A	R	N	T
Template Known Secondary structure										T	T															T	T				G	G	G	G										S	S															T	T	S
Template Predicted Secondary structure
Template SS confidence
		758	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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