Job Description P39369 Confidence 88.58% Date Thu Jan 5 12:00:01 GMT 2012 Rank 39 Aligned Residues 85 % Identity 13% Template c2f5tX_ PDB info PDB header:transcription Chain: X: PDB Molecule:archaeal transcriptional regulator trmb; PDBTitle: crystal structure of the sugar binding domain of the archaeal2 transcriptional regulator trmb Resolution 1.45 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	H	D	E	F	L	N	K	T	L	A	G	A	Q	K	K	I	T	I	I	S	P	W	L	S	W	Q	K	V	E	Q	T	G	F	L	A	S	M	A	L	A	R	S	R	G	I	D	I	T	V	V	T	D	K	N	C	N	I	A	H	V	D	D	D	K	R	Q	E	K	Q	H	L	L	N	D	A	V	E	K
Query Conservation
Alig confidence																									.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	A	I	E	M	F	R	E	S	L	Y	S	A	K	N	E	V	I	V	V	T	P	.	.	.	.	.	S	E	F	F	E	T	I	R	E	D	L	I	K	T	L	E	R	G	V	T	V	S	L	Y	I	D	K	I	P	D	L	S	E	F	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T		S	S								.	.	.	.	.	G	G	G														T	T								S	S					G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	K	M	G	I	A	T	K	L	V	N	R	V	H	S	K	I	V	I	E	D	E	E	L	L	C	V
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	K	G	N	F	F	V	R	Q	F	Y	K	L	N	H	L	I	G	M	T	D	G	K	E	V	V	T
Template Known Secondary structure		.	.	S	S								S				S						T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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