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Job DescriptionP39369
Confidence99.45%DateThu Jan 5 12:00:01 GMT 2012
Rank11Aligned Residues88
% Identity17%Templatec1w36G_
PDB info PDB header:recombinationChain: G: PDB Molecule:exodeoxyribonuclease v alpha chain; PDBTitle: recbcd:dna complex
Resolution3.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90.........100.........110.........120......
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Query Sequence  YKVVGVVTPFSAQVNAIKMSLRKLEINGKDEQGLLTVGTVHSLQGAERAIVLFSPVYSKHEDGRFLDSNSTILNVAVSRA
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Template Sequence  EGPFGVAGLNERIEQFMQQKRQPSRL. . . PEHETTWAMTVHKSQGSEFDHAALILPSQR. . . . . TPVVTRELVYTAVTRA
Template Known Secondary structure  SSSSSGGGTS



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   446...450.........460.........470. ........480.........490.........500. ........510.......
 
   127..130.........140..
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Query Sequence  KDSFLVFGDMDLIEMQ
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Template Sequence  RRRLSLYADERILSAA
Template Known Secondary structure  SS


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   574.....580.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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