Job Description P39369 Confidence 94.83% Date Thu Jan 5 12:00:01 GMT 2012 Rank 34 Aligned Residues 127 % Identity 13% Template c1w36F_ PDB info PDB header:recombination Chain: F: PDB Molecule:exodeoxyribonuclease v gamma chain; PDBTitle: recbcd:dna complex Resolution 3.1 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	E	T	I	A	A	W	L	V	A	H	K	D	D	I	E	R	H	Y	G	E	P	L	Y	K	V	V	G	V	V	T	P	F	S	A	Q	V	N	A	I	K	M	S	L	R	K	L	E	I	N	G	K	D	E	Q	G	L	L	T	V	G	T	V	H	S	L	Q	G	A	E	R	A	I	V	L	F	S	P
Query Conservation
Alig confidence																										.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.
Template Sequence		A	A	M	T	L	I	E	Q	Q	W	Q	A	I	I	A	E	G	L	G	A	Q	Y	G	D	.	.	.	.	.	.	.	A	V	P	L	S	L	L	R	D	E	L	A	Q	R	L	D	Q	E	R	I	S	Q	R	F	L	A	G	P	V	N	I	C	T	L	M	P	M	R	S	I	P	F	K	V	V	C	L	L	G
Template Known Secondary structure																					T	T			S	.	.	.	.	.	.	.																						T	T	T	T	S	S	S								T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.
Template SS confidence
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630								.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.
		102	.	.						.	.	.	.	.	110	.	.															.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Y	S	.	.	.	.	.	K	H	E	D	G	R	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	N	S	T	I	L	N	V	A	V	S	R	A	K	D	S	F	L	V	F	G	D	M	D	L	I	E	M	Q	P	A	F	S	P	R	G	L	L	A	K	Y	L
Query Conservation					.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	N	D	G	V	Y	P	R	Q	L	A	P	L	G	F	D	L	M	S	Q	K	P	K	R	G	D	R	S	R	R	D	D	D	R	Y	L	F	L	E	A	L	I	S	A	Q	Q	K	L	Y	I	S	Y	I	G	R	S	I	Q	D	N	S	E	R	F	P	S	V	L	V	Q	E	L	I
Template Known Secondary structure			B	T	T	T	S	S							S	S						S			T	T																														B		S	S	S			B			B
Template Predicted Secondary structure
Template SS confidence
		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions