Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6X1
Confidence96.55%DateThu Jan 5 11:04:08 GMT 2012
Rank493Aligned Residues74
% Identity19%Templatec3uagA_
PDB info PDB header:ligaseChain: A: PDB Molecule:protein (udp-n-acetylmuramoyl-l-alanine:d- PDBTitle: udp-n-acetylmuramoyl-l-alanine:d-glutamate ligase
Resolution1.77 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   179180.........190.........200.........210.........220.........230.........240.........250...
Predicted Secondary structure 
























Query SS confidence 










































































Query Sequence  SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEVGAEVIALSDIDERLREADIIISSTASP
Query Conservation   
  
 






 

   
  
   
   
 
 


  

  

   
        
   
  







 
 
Alig confidence 



























.













































Template Conservation      
 
 
 
 
 

 
 
  
   
 . 
 


                              
 

 

 
 
Template Sequence  DYQGKNVVIIGLGLTGLSCVDFFLARGV. TPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIA
Template Known Secondary structure 

TT



STTT
.

SSSS
TTGGGS
TTS
SS

TT
S
TTS
Template Predicted Secondary structure 










.



















Template SS confidence 










































































   2.......10.........20......... 30.........40.........50.........60.........70.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions