Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6X1
Confidence99.90%DateThu Jan 5 11:04:08 GMT 2012
Rank4Aligned Residues138
% Identity25%Templatec3oj0A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glutamyl-trna reductase; PDBTitle: crystal structure of glutamyl-trna reductase from thermoplasma2 volcanium (nucleotide binding domain)
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   161........170.........180.........190.........200.........210.........220.........230.........240
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  SAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEVGAEVIALSDIDERL
Query Conservation     

 
 

 

   
  
  
 






 

   
  
   
   
 
 


  

  

   
        
   
Alig confidence 















....

























.
































Template Conservation 
 



  
       .... 

 
 


 
 

   
  
   
 . 
    
        
                 
Template Sequence  GKVSIPSIVYDIVRKN. . . . GGNKILLVGNGXLASEIAPYFSYPQY. KVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLI
Template Known Secondary structure 


S....




SGGG

TTT
.S
T

S
Template Predicted Secondary structure 


....







.








Template SS confidence 















































































   1........10...... ...20.........30.........40.. .......50.........60.........70.....
 
   241........250.........260.........270.........280.........290.........300.........310.......
Predicted Secondary structure 
































Query SS confidence 












































































Query Sequence  READIIISSTASPLPIIGKGMVERALKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAA
Query Conservation    







 
  


    
      
      











 
  
  
 
  



  
       
   
Alig confidence 

























........











......
























Template Conservation    




 

     

    
  
 ........ 




 
  

......    
   
 
          
   
Template Sequence  KNNDVIITATSSKTPIVEERSLXPGK. . . . . . . . LFIDLGNPPNIE. . . . . . RGNNVITLDEIYEISKKNEXLREEK
Template Known Secondary structure  T
S
S

SS
SB
GGG

TT
........

SS
SB
......
STTSTT

Template Predicted Secondary structure 















........







......




Template SS confidence 












































































   76...80.........90.........100. ........110... ......120.........130........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions