Job Description P0A6X1 Confidence 99.61% Date Thu Jan 5 11:04:08 GMT 2012 Rank 13 Aligned Residues 233 % Identity 18% Template c3o8qB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase i alpha; PDBTitle: 1.45 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae Resolution 1.45 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.											.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	V	S	H	L	M	R	V	A	S	G	L	D	S	L	V	L	G	E	P	Q	I	L	G	Q	V	K	K	A	F	A	D	S	Q	K	G	H	M	K	A	.	.	.	.	.	S	E	L	E	R	M	F	Q	K	S	F	S	V	A	K	R	.	.	.	.	.	.	.	.	.	.	V	R	T	E	T	D	I	G
Query Conservation																																											.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	F	I	H	T	L	F	A	R	Q	T	Q	Q	S	M	I	Y	T	A	Q	C	V	P	V	D	G	F	T	E	A	A	K	H	F	F	A	Q	G	G	R	G	C	N	V	T	V	P	F	K	E	E	A	Y	R	F	A	D	R	L	T	E	R	A	R	L	A	G	A	V	N	T	L	K	K	L	D	D	G	E	I
Template Known Secondary structure													T												T	T												T	T								T	T										S										T			S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		A	S	A	V	S	V	A	F	A	A	C	T	L	A	R	Q	I	F	E	S	L	S	T	V	T	V	L	L	V	G	A	G	E	T	I	E	L	V	A	R	H	L	R	E	H	K	V	Q	K	M	I	I	A	N	R	T	R	E	R	A	Q	I	L	A	D	E	V	.	G	A	E	V	I	A	L	S	D	I	D	E
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		L	G	D	N	T	D	G	E	G	L	V	Q	D	L	L	A	Q	Q	V	L	L	K	G	A	T	I	L	L	I	G	A	G	G	A	A	R	G	V	L	K	P	L	L	D	Q	Q	P	A	S	I	T	V	T	N	R	T	F	A	K	A	E	Q	L	A	E	L	V	A	A	Y	G	E	V	K	A	Q	A	F	E	Q
Template Known Secondary structure																		T	T				T	T									S												T	T			S							S	S											T	G	G	G	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		R	L	R	E	A	D	I	I	I	S	S	T	A	S	P	L	P	I	I	G	K	G	M	V	E	R	A	L	K	S	R	R	N	Q	P	M	L	L	V	D	I	A	V	P	R	D	V	E	P	E	V	G	K	L	A	N	A	Y	L	Y	S	V	D	D	L	Q	S	I	I	S	H	N	L	A	Q	R	.	K	A	A
Query Conservation																																																																														.
Alig confidence																														.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																														.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	Q	S	Y	D	V	I	I	N	S	T	S	G	E	L	P	A	I	D	P	V	I	F	S	S	R	S	.	.	.	.	.	.	.	.	V	C	Y	D	M	M	Y	G	K	G	Y	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	Q	W	A	R	Q	H	G	C	A	Q	A
Template Known Secondary structure				S			S															G	G	G			T	T		.	.	.	.	.	.	.	.					S				S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T		S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.									.	210	.	.	.	.	.	.	.	.	.	220	.																			.	.	.	.	.	.	.	.	230	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		A	V	E	A	E	T	I	V	A	Q	E	T	S	E	F	M	A	W	L	R	A	Q	.	S	A	S	E	T	I	R	E	Y	R	S	Q	A	E
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		I	D	G	L	G	M	L	V	G	Q	A	A	E	S	F	M	L	W	R	G	L	R	P	G	T	K	Q	I	L	R	E	L	R	K	N	L	E
Template Known Secondary structure				T																	S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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