Job Description P0A6X1 Confidence 97.11% Date Thu Jan 5 11:04:08 GMT 2012 Rank 352 Aligned Residues 133 % Identity 11% Template c3grfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: x-ray structure of ornithine transcarbamoylase from giardia2 lamblia Resolution 2.00 Å

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		174	.	.	.								.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.											.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.
Predicted Secondary structure						.	.	.	.	.	.	.													.	.																												.	.	.	.	.	.	.	.	.	.											.	.
Query SS confidence						.	.	.	.	.	.	.													.	.																												.	.	.	.	.	.	.	.	.	.											.	.
Query Sequence		R	Q	I	F	.	.	.	.	.	.	.	E	S	L	S	T	V	T	V	L	L	V	G	.	.	A	G	E	T	I	E	L	V	A	R	H	L	R	E	H	K	V	Q	K	M	I	I	A	N	R	T	R	.	.	.	.	.	.	.	.	.	.	E	R	A	Q	I	L	A	D	E	V	.	.	G	A	E	V	I	A
Query Conservation						.	.	.	.	.	.	.													.	.																												.	.	.	.	.	.	.	.	.	.											.	.
Alig confidence						.	.	.	.	.	.	.													.	.																		.										.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																																												.
Template Sequence		K	E	K	F	T	A	A	G	E	F	S	N	G	F	K	G	I	K	F	A	Y	C	G	D	S	M	N	N	V	T	Y	D	L	M	R	G	C	A	L	L	G	M	.	E	C	H	V	C	C	P	D	H	K	D	F	K	P	I	K	E	V	I	D	E	C	E	E	I	I	A	K	H	G	T	G	G	S	I	K	I
Template Known Secondary structure								T	T			T	T	T	G	G	G							S			S	S														T		.								S	S	G	G	G	S																	T
Template Predicted Secondary structure																																												.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.									.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																								.	.	.	.	.	.	.	.																													.	.			.	.
Query SS confidence																								.	.	.	.	.	.	.	.																													.	.			.	.
Query Sequence		L	S	D	I	D	E	R	L	R	E	A	D	I	I	I	S	S	T	A	S	P	L	.	.	.	.	.	.	.	.	P	I	I	G	K	G	M	V	E	R	A	L	K	S	R	R	N	Q	P	M	L	L	V	D	I	A	V	P	.	.	R	D	.	.	V	E	P	E	V	G	K	L	A	N	A	Y	L	Y	S	V
Query Conservation																								.	.	.	.	.	.	.	.																													.	.			.	.
Alig confidence																								.	.	.	.	.	.	.	.												.	.	.	.	.	.												.	.			.	.															.	.
Template Conservation																																											.	.	.	.	.	.																																.	.
Template Sequence		F	H	D	C	K	K	G	C	E	G	V	D	V	V	Y	T	D	S	W	M	K	E	A	R	L	K	V	L	T	P	F	Q	V	D	D	A	V	M	A	V	T	.	.	.	.	.	.	S	K	R	S	I	F	M	N	C	L	P	A	T	R	G	E	E	Q	T	A	S	V	I	D	G	P	K	S	V	C	Y	.	.
Template Known Secondary structure			S	S						T	T		S											T						G	G	G		B						T	T	S	.	.	.	.	.	.		T	T							S				T	T	T	T	B						T	S	T	T	B				.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.																																.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.							.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	L	Q	S	I	I	S	H	N	L	A	Q	R	K	A	A	A	V
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	D	E	A	G	N	R	L	H	S	A	M	A	V	L	D
Template Known Secondary structure		.	.	.	.
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						304	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions