Job Description P0A6X1 Confidence 97.53% Date Thu Jan 5 11:04:08 GMT 2012 Rank 251 Aligned Residues 155 % Identity 17% Template c3g79A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1 Resolution 2.40 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.																.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		H	M	K	A	S	E	L	E	R	M	F	Q	K	S	F	S	V	A	K	R	V	R	T	E	T	D	I	G	A	S	A	V	S	V	A	F	A	A	C	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	Q	I	F	E	S	L	S	T	V	T	V	L	L	V	G	A	G	.	.	.	.	.
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		G	V	G	G	H	C	L	T	K	D	T	Y	H	L	E	R	G	V	K	I	G	R	G	E	L	D	Y	P	E	G	A	D	S	I	Y	V	L	A	R	K	V	N	D	F	M	P	A	H	M	Y	N	L	T	V	A	A	L	E	R	L	G	K	K	M	D	G	S	K	V	A	M	L	G	W	A	F	I	K	D	S
Template Known Secondary structure					S	S														T	T	S	S							S	S																													T	T	T			S	T	T								S	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
							192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	E	T	I	E	L	V	A	R	H	L	R	E	H	K	V	Q	K	M	I	I	A	N	R	T	R	E	R	A	Q	I	L	A	D	E	V	G	A	E	V	I	A	L	S	D	I	D	E	R	L	R	E	A	D	I	I	I	S	S	T	A	S	P	L	P	I	I	G	K	G	M	V	E	R	A	L
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																.										.	.	.	.	.	.										.	.
Template Conservation																						.										.	.	.	.	.	.										.	.
Template Sequence		D	D	A	R	N	T	P	S	E	P	Y	R	D	L	C	L	K	A	G	A	.	S	V	M	V	H	D	P	Y	V	.	.	.	.	.	.	V	N	Y	P	G	V	E	I	S	.	.	D	N	L	E	E	V	V	R	N	A	D	A	I	V	V	L	A	G	H	S	A	Y	S	S	L	K	A	D	W	A	K	K	V
Template Known Secondary structure		S			T	T		T												T		.							S	S		.	.	.	.	.	.			B	T	T	B				.	.	S							T	T		S						S							S
Template Predicted Secondary structure																						.										.	.	.	.	.	.										.	.
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.							.	.	.	400	.	.	.	.	.			.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		K	S	R	R	N	Q	P	M	L	L	V	D	I	A	V	P	R	D	V	.	E	P	E	V	G	K	L	A	N	A	Y	L	Y	S	V
Query Conservation																					.
Alig confidence								.	.						.	.	.				.
Template Conservation								.	.						.	.	.
Template Sequence		S	A	K	A	N	P	.	.	V	I	I	D	G	.	.	.	R	N	V	I	E	P	D	E	F	I	G	K	G	F	V	Y	K	G	I
Template Known Secondary structure					S	S		.	.					S	.	.	.	S	S		S							T	T	T						T
Template Predicted Secondary structure								.	.						.	.	.
Template SS confidence
		439	440	.	.	.	.			.	.	.	.	.				450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions