|   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | F | E | S | L | S | T | V | T | V | L | L | V | G | A | G | E | T | I | E | L | V | A | R | H | L | R | E | H | K | V | Q | K | M | I | I | A | N | R | T | R | E | R | A | Q | I | L | A | D | E | V | G | A | E | V | I | A | L | S | D | I | D | E | R | L | R | E | A | D | I | I | I | S | S | T | A | S | P | L | P |
Query Conservation |   |
  |
|   |   |
|   |   |
|   |
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|
|
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
|
|
|   |
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |   |
|
|   |   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|
|   |
|
|   |
|   | . | . |
Template Sequence |   |
V | M | L | D | L | K | G | R | S | V | L | V | V | G | G | G | T | I | A | T | R | R | I | K | G | F | L | Q | E | G | A | A | I | T | V | V | A | P | T | V | S | A | E | I | N | E | W | E | A | K | G | Q | L | R | V | K | R | K | K | V | G | E | E | D | L | L | N | V | F | F | I | V | V | A | T | N | D | Q | . |
. |
Template Known Secondary structure |   |
|
|
|
|
| T | T |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
| S |
|
|
| G | G | G | G | S | S |
| S |  |  |  |  |
|
| S |
|  | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
|
  |
  |   |
256 | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | |
|
|
. | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | I | G | K | G | M | V | E | R | A | L | K | S | R | R | N | Q | P | M | L | L | V | D | I | A | V | P | R | D | V | E | P | E | V | G | K | L | A | N | A | Y | L | Y | S | V | D | D | L | Q | S | I | I | S | . |
. |
. |
H | N | L | A | Q | R | K | A | A | A | V | E | A | E | T | I | V | A | Q | E | T | S | E | F |
Query Conservation |   |
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |
|   |
|   |   |
|
|
|
|   |   |
|   |   | . | . | . |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |
| . | . | . | . | . | . | . |   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |
|
|
|
|
|   |
|   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
A | V | N | K | F | V | K | I | K | N | D | Q | L | V | N | M | A | S | . |
. |
. |
. |
. |
. |
. |
S | F | S | D | G | N | I | Q | I | P | A | Q | F | S | R | G | R | L | S | L | A | I | S | T | D | G | A | S | P | L | L | T | K | R | I | K | E | D | L | S | S | N | Y | D | E | S | Y | T | Q | Y |
Template Known Secondary structure |   |
. | . | . | . | . |  |  |  |  |  |  |
|
|
| T | T |
|  |  |  |  | T | T | . | . | . | . | . | . | . |
| S | S |
|
| S | B |
|
|
|  |  |  |  |  | T | T |  |  |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
  |
  |   |
333 | . | . | . | . | . | . | |
|
|
|
|
340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | W | L | R | A | Q | . |
. |
. |
. |
. |
S | A | S | E | T | I | R | E | Y | R | S | Q | A | E | Q | V | R | D | E | L | T | A | K | A | L | A | A |
Query Conservation |   |
  |   |
|   |   |   |   | . | . | . | . | . |   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | Q | F | L | Y | E | C | R | V | L | I | H | R | L | N | V | S | K | S | R | K | H | E | L | L | T | E | I | I | D | D | Q | Y | R | L | S | L | V | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |
|  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
  |