Job Description P0A6X1 Confidence 97.25% Date Thu Jan 5 11:04:08 GMT 2012 Rank 312 Aligned Residues 222 % Identity 16% Template c3aogA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase (gdhb) from thermus2 thermophilus (glu bound form) Resolution 2.10 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.														.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	G	H	M	K	A	S	E	L	E	R	M	F	Q	K	S	F	S	V	A	K	R	V	R	T	E	T	D	I	G	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	S	V	A	F	A	A	C	T	L	A	R	Q	I	F	E	S	L	S	T	V	T	V	L	L	V	G	A	G	E	T	I	E	L
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	N	T	G	E	R	E	M	A	W	M	M	D	T	Y	S	M	N	V	G	R	T	V	P	G	V	V	T	G	K	P	I	A	L	G	G	S	L	G	R	R	D	A	T	G	R	G	V	F	I	T	A	A	A	A	A	E	K	I	G	L	Q	V	E	G	A	R	V	A	I	Q	G	F	G	N	V	G	N	A
Template Known Secondary structure			T	T																		T	S			G	G	G	S	S	S			G	G	G	T			T	T		T	T																		T			S	T	T									S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.											.	.	.	.	.	220	.	.	.	.	.	.	.								.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Query Sequence		V	A	R	H	L	R	E	H	K	V	Q	K	M	I	I	A	N	R	.	.	.	.	.	.	.	.	.	.	T	R	E	R	A	Q	I	L	A	D	E	V	G	.	.	.	.	.	.	.	A	E	V	I	A	L	S	D	I	D	E	R	L	R	E	A	D	I	I	I	S	S	T	A	S	P	L	P	I	I	G	K
Query Conservation																				.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.													.	.									.	.
Template Conservation																																																														.	.									.	.
Template Sequence		A	A	R	A	F	H	D	H	G	A	R	V	V	A	V	Q	D	H	T	G	T	V	Y	N	E	A	G	I	D	P	Y	D	L	L	R	H	V	Q	E	F	G	G	V	R	G	Y	P	K	A	E	P	L	P	A	A	D	F	W	G	L	.	.	P	V	E	F	L	V	P	A	.	.	A	L	E	K	Q	I	T	E
Template Known Secondary structure									T	T									S	S						T	T														T	S	S	S	T	T		T	T	S									T	T		.	.			S						.	.	S	S	S	S		B		T
Template Predicted Secondary structure																																																														.	.									.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.				.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.											.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																			.	.	.								.	.														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.								.	.														.	.	.	.	.	.	.	.	.	.
Query Sequence		G	M	V	E	R	A	L	K	S	R	R	N	Q	P	M	L	L	V	D	I	A	V	P	R	D	V	E	P	E	V	G	K	L	.	.	.	A	N	A	Y	L	Y	S	.	.	V	D	D	L	Q	S	I	I	S	H	N	L	A	.	.	.	.	.	.	.	.	.	.	Q	R	K	A	A	A	V	E	A	E	T	I
Query Conservation																																			.	.	.								.	.														.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.										.									.	.	.								.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.										.
Template Sequence		Q	N	A	W	R	I	R	A	R	.	.	.	.	.	.	I	V	A	E	G	A	N	G	P	.	T	T	P	A	A	D	D	I	L	L	E	K	G	V	L	V	V	P	D	V	I	A	N	A	G	G	V	T	V	S	Y	F	E	W	V	Q	D	F	N	S	Y	F	W	T	E	E	E	I	N	A	R	L	E	R	V
Template Known Secondary structure		T	T	G	G	G				S	.	.	.	.	.	.						S	S	S		.	B												T										T	T														T	T	T
Template Predicted Secondary structure											.	.	.	.	.	.										.
Template SS confidence
		310	.	.	.	.	.	.	.	.							.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	Q	E	T	S	E	F	M	A	W	L	R	A	Q	S	A	S	E	T	I	R	E	Y	R	S	Q	A	E	Q	V	R	D	E	L	T	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	N	A	F	E	A	V	W	Q	V	A	Q	E	K	K	I	P	L	R	T	A	A	Y	V	V	A	A	T	R	V	L	E	A	R	A	L	R
Template Known Secondary structure																	T
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions