Job Description P0A6X1 Confidence 96.70% Date Thu Jan 5 11:04:08 GMT 2012 Rank 471 Aligned Residues 222 % Identity 14% Template c3aoeC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of hetero-hexameric glutamate dehydrogenase from2 thermus thermophilus (leu bound form) Resolution 2.60 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.														.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	G	H	M	K	A	S	E	L	E	R	M	F	Q	K	S	F	S	V	A	K	R	V	R	T	E	T	D	I	G	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	S	V	A	F	A	A	C	T	L	A	R	Q	I	F	E	S	L	S	T	V	T	V	L	L	V	G	A	G	E	T	I	E	L
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	G	A	D	Q	Q	V	M	A	W	I	M	D	T	Y	S	M	T	V	G	S	T	V	P	G	V	V	T	G	K	P	H	A	L	G	G	S	E	G	R	D	D	A	A	G	L	G	A	L	L	V	L	E	A	L	A	K	R	R	G	L	D	L	R	G	A	R	V	V	V	Q	G	L	G	Q	V	G	A	A
Template Known Secondary structure		B	T	T	B																	T	S			G	G	G	B	S	S			G	G	G	T			S	S		S	S																	T	T				T	T									S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.											.	.	.	.	.	220	.	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.														.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.														.	.	.
Query Sequence		V	A	R	H	L	R	E	H	K	V	Q	K	M	I	I	A	N	R	.	.	.	.	.	.	.	.	.	.	T	R	E	R	A	Q	I	L	A	D	E	V	G	.	.	.	A	E	V	I	A	L	S	D	I	D	E	R	L	R	E	A	D	I	I	I	S	S	T	A	S	P	L	P	I	I	G	K	G	M	V	E
Query Conservation																				.	.	.	.	.	.	.	.	.	.														.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.														.	.	.													.	.									.	.
Template Conservation																																																										.	.									.	.
Template Sequence		V	A	L	H	A	E	R	L	G	M	R	V	V	A	V	A	T	S	M	G	G	M	Y	A	P	E	G	L	D	V	A	E	V	L	S	A	Y	E	A	T	G	S	L	P	R	L	D	L	A	P	E	E	V	F	G	L	.	.	E	A	E	V	L	V	L	A	.	.	A	R	E	G	A	L	D	G	D	R	A	R
Template Known Secondary structure									T	T									T	T						T	T															S	S		S				B		G	G	G	S	T	T	S	.	.	S		S						.	.	S	S	S	S		B						T
Template Predicted Secondary structure																																																										.	.									.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.				.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.											.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.								.	.														.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.								.	.														.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	L	K	S	R	R	N	Q	P	M	L	L	V	D	I	A	V	P	R	D	V	E	P	E	V	G	K	L	.	.	.	A	N	A	Y	L	Y	S	.	.	V	D	D	L	Q	S	I	I	S	H	N	L	A	.	.	.	.	.	.	.	.	.	.	Q	R	K	A	A	A	V	E	A	E	T	I	V	A	Q	E
Query Conservation																															.	.	.								.	.														.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.										.									.	.	.								.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.										.
Template Sequence		Q	V	Q	A	Q	.	.	.	.	.	.	A	V	V	E	V	A	N	F	G	.	L	N	P	E	A	E	A	Y	L	L	G	K	G	A	L	V	V	P	D	L	L	S	G	G	G	G	L	L	A	S	Y	L	E	W	V	Q	D	L	N	M	F	F	W	S	P	E	E	V	R	E	R	F	E	T	R	V	A	R	V
Template Known Secondary structure		T				S	.	.	.	.	.	.						S	T	T		.	B											T	T										T																	T
Template Predicted Secondary structure							.	.	.	.	.	.										.
Template SS confidence
		309	310	.	.	.							.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	E	F	M	A	W	L	R	A	Q	S	A	S	E	T	I	R	E	Y	R	S	Q	A	E	Q	V	R	D	E	L	T	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	A	V	C	R	R	A	E	R	G	G	L	D	L	R	M	G	A	L	A	L	A	L	E	R	L	D	E	A	T	R	L	R
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions