Job Description P0A6X1 Confidence 99.08% Date Thu Jan 5 11:04:08 GMT 2012 Rank 38 Aligned Residues 158 % Identity 21% Template c2ev9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from thermus2 thermophilus hb8 in complex with nadp(h) and shikimate Resolution 1.90 Å

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		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	A	C	T	L	A	R	Q	I	F	E	S	L	S	T	V	T	V	L	L	V	G	A	G	E	T	I	E	L	V	A	R	H	L	R	E	H	K	V	Q	K	M	I	I	A	N	R	T	R	E	R	A	Q	I	L	A	D	E	V	G	A	E	V	I	A	L	S	D	I	D	E	R	L	R	E	A	D	I	I
Query Conservation
Alig confidence																																										.																													.	.	.	.
Template Conservation																																										.																													.	.	.	.
Template Sequence		A	P	G	F	L	E	A	L	K	A	G	G	I	P	L	K	G	P	A	L	V	L	G	A	G	G	A	G	R	A	V	A	F	A	L	R	E	A	G	L	.	E	V	W	V	W	N	R	T	P	Q	R	A	L	A	L	A	E	E	F	G	L	R	A	V	P	L	E	K	.	.	.	.	A	R	E	A	R	L	L
Template Known Secondary structure												T	T					S								S													T	T		.							S	S												T						G	G	G	.	.	.	.	G	G	G		S
Template Predicted Secondary structure																																										.																													.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.
		247	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure								.	.	.	.	.
Query SS confidence								.	.	.	.	.
Query Sequence		I	S	S	T	A	S	.	.	.	.	.	P	L	P	I	I	G	K	G	M	V	E	R	A	L	K	S	R	R	N	Q	P	M	L	L	V	D	I	A	V	P	R	D	V	E	P	E	V	G	K	L	A	N	A	Y	L	Y	S	V	D	D	L	Q	S	I	I	S	H	N	L	A	Q	R	K	A	A	A	V	E	A
Query Conservation								.	.	.	.	.
Alig confidence								.	.	.	.	.															.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	N	A	T	R	V	G	L	E	D	P	S	A	S	P	L	P	A	E	L	F	P	E	E	G	.	.	.	.	.	.	.	.	A	A	V	D	L	V	Y	R	P	L	W	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	R	E	A	K	A	K	G	L	K	V	Q	T	G	L
Template Known Secondary structure					S	S	T	T	T	T		T	T			S	S		G	G	G			S	S		.	.	.	.	.	.	.	.					S			S	S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T						S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200									.	.	.	.	.	.	.	.	.	210	.	.	.																			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	I	V	A	Q	E	T	S	E	F	M	A	W	L	R	A	Q	S	A	S	E	T	I	R	E	Y	R	S	Q	A	E	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	M	L	A	W	Q	G	A	L	A	F	R	L	W	T	G	L	L	P	D	P	S	G	M	E	E	A	A	R	R	A	L	G	V
Template Known Secondary structure																	S																	T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions