Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6X1
Confidence97.73%DateThu Jan 5 11:04:08 GMT 2012
Rank209Aligned Residues100
% Identity18%Templatec1ur5C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:malate dehydrogenase; PDBTitle: stabilization of a tetrameric malate dehydrogenase by2 introduction of a disulfide bridge at the dimer/dimer3 interface
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   183......190.........200.........210.........220..... ....230.........240.........250...
Predicted Secondary structure 









.........










Query SS confidence 










































. . . . . . . . .



























Query Sequence  VTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADE. . . . . . . . . VGAEVIALSDIDERLREADIIISSTASP
Query Conservation 
 






 

   
  
   
   
 
 


  

  

  ......... 
        
   
  







 
 
Alig confidence 










































.........









.
















Template Conservation   

 




 

   
  
    
 

 
 

      
   

            
     .   
  





 

 
Template Sequence  KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN. YADTANSDVIVVTSGAR
Template Known Secondary structure 


STT
S
SSTTTTT



S
.GGGGTT
S




Template Predicted Secondary structure 

















.








Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.... .....70.........80.
 
   254.. ...260.........270.........280.....
Predicted Secondary structure 


......













Query SS confidence 


. . . . . .




























Query Sequence  LPI. . . . . . IGKGMVERALKSRRNQPMLLVDIAVPRDV
Query Conservation   

......
    
      
      









Alig confidence 


......















..










Template Conservation        
  
       
    
  .. 


 


 
 
Template Sequence  EDLIKVNADITRACISQAAPLSPNA. . VIIMVNNPLDA
Template Known Secondary structure  GGG
TT
..

SS
Template Predicted Secondary structure 


..


Template SS confidence 





































   8990.........100.........110... ......120....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions