Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6X1
Confidence98.91%DateThu Jan 5 11:04:08 GMT 2012
Rank47Aligned Residues121
% Identity20%Templatec1pjcA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:protein (l-alanine dehydrogenase); PDBTitle: l-alanine dehydrogenase complexed with nad
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190.........200.........210.........220....... ..230.........240.........250..
Predicted Secondary structure 

















....







Query SS confidence 


















































. . . .
























Query Sequence  FESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEVG. . . . AEVIALSDIDERLREADIIISSTAS
Query Conservation 
  
  
 






 

   
  
   
   
 
 


  

  

   
....        
   
  







 
Alig confidence 





























.



















....
























Template Conservation     
    
 


 
 

  

     

 . 
   
                          
       



     
Template Sequence  VPGVKPGKVVILGGGVVGTEAAKMAVGLGA. QVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLV
Template Known Secondary structure  BTTB




STT
.S
GGGS

T
S



Template Predicted Secondary structure 












.

















Template SS confidence 















































































   162.......170.........180.........190. ........200.........210.........220.........230.........240
 
   253.. ....260.........270.........280 .........290.........300...
Predicted Secondary structure 


....









..........












Query SS confidence 


. . . .
























. . . . . . . . . .






















Query Sequence  PLP. . . . IIGKGMVERALKSRRNQPMLLVDIA. . . . . . . . . . VPRDVEPEVGKLANAYLYSVDDL
Query Conservation    
....

    
      
      




..........






 
  
  
 
  



Alig confidence 


....









.....









..........






















Template Conservation       
 

    
  
.....
 
 





 
 

 

    
    
     

    
  
Template Sequence  PGRRAPILVPASLVEQM. . . . . RTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNM
Template Known Secondary structure  TTSS



B
TTS.....
TT
TT
TT

SBTT




SSS
TT

S
G
Template Predicted Secondary structure 










.....




























Template SS confidence 
































































   241........250....... ..260.........270.........280.........290.........300
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions