Job Description P0A6X1 Confidence 99.17% Date Thu Jan 5 11:04:08 GMT 2012 Rank 33 Aligned Residues 157 % Identity 22% Template c1nytC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: shikimate dehydrogenase aroe complexed with nadp+ Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		A	F	A	A	C	T	L	A	R	Q	I	F	E	S	L	S	T	V	T	V	L	L	V	G	A	G	E	T	I	E	L	V	A	R	H	L	R	E	H	K	V	Q	K	M	I	I	A	N	R	T	R	E	R	A	Q	I	L	A	D	E	V	G	.	.	A	E	V	I	A	L	S	D	I	D	E	R	L	R	E	A
Query Conservation																																																																.	.
Alig confidence																																												.																				.	.
Template Conservation																																												.
Template Sequence		G	V	G	L	L	S	D	L	E	R	L	S	F	I	R	P	G	L	R	I	L	L	I	G	A	G	G	A	S	R	G	V	L	L	P	L	L	S	L	D	C	A	.	V	T	I	T	N	R	T	V	S	R	A	E	E	L	A	K	L	F	A	H	T	G	S	I	Q	A	L	S	M	D	E	L	E	G	H	E	F
Template Known Secondary structure													T				T	T									S													T	T			.						S	S											T	T	T	T	S							T	G	G	G	T	T
Template Predicted Secondary structure																																												.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		244	.	.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.
Predicted Secondary structure											.	.	.	.																													.																																					.
Query SS confidence											.	.	.	.																													.																																					.
Query Sequence		D	I	I	I	S	S	T	A	S	.	.	.	.	P	L	P	I	I	G	K	G	M	V	E	R	A	L	K	S	R	R	N	Q	P	M	L	L	V	D	I	A	.	V	P	R	D	V	E	P	E	V	G	K	L	A	N	A	Y	L	Y	S	V	D	D	L	Q	S	I	I	S	H	N	L	A	Q	R	K	A	.	A
Query Conservation											.	.	.	.																													.																																					.
Alig confidence											.	.	.	.															.	.	.	.	.	.	.	.							.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																													.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	I	I	N	A	T	S	S	G	I	S	G	D	I	P	A	I	P	S	S	L	I	H	P	G	I	.	.	.	.	.	.	.	.	Y	C	Y	D	M	F	Y	Q	K	G	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	L	A	W	C	E	Q	R	G	S	K	R	N
Template Known Secondary structure		S						S	S		G	G	G	T							G	G	G			T	T		.	.	.	.	.	.	.	.					S				S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.									.	210	.	.	.	.	.	.	.	.	.	220																				.	.	.	.	.	.	.	.	.	230	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		A	V	E	A	E	T	I	V	A	Q	E	T	S	E	F	M	A	W	L	R	A	Q	.	S	A	S	E	T	I	R	E	Y	R	S
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		A	D	G	L	G	M	L	V	A	Q	A	A	H	A	F	L	L	W	H	G	V	L	P	D	V	E	P	V	I	K	Q	L	Q	E
Template Known Secondary structure				T																	S	S													T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions