Job Description P0A6X1 Confidence 99.83% Date Thu Jan 5 11:04:08 GMT 2012 Rank 5 Aligned Residues 204 % Identity 19% Template c1luaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:methylene tetrahydromethanopterin dehydrogenase; PDBTitle: structure of methylene-tetrahydromethanopterin dehydrogenase from2 methylobacterium extorquens am1 complexed with nadp Resolution 1.90 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	W	H	Q	D	N	D	A	V	S	H	L	M	R	V	A	.	.	.	.	S	G	L	D	S	L	V	L	G	E	P	Q	I	L	G	Q	V	K	K	A	F	A	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	G	H	M	K	A	S	E	L	E	R	M	F	Q	K	S	F
Query Conservation																			.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	F	Q	F	D	T	D	A	T	P	S	V	F	D	V	V	V	G	Y	D	G	G	A	D	H	I	T	G	Y	G	N	V	T	P	D	N	V	G	A	Y	V	D	G	T	I	Y	T	R	G	G	K	E	K	Q	S	T	A	I	F	V	G	G	G	D	M	A	A	G	E	R	V	F	E	A	V	K	K	R	F
Template Known Secondary structure								S	S	S	S												T	T		S						S	S			T	T	T										S	S			G	G	G	G	G	G								S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																		.												.
Query SS confidence																																		.												.
Query Sequence		S	V	A	K	R	V	R	T	E	T	D	I	G	A	S	A	V	S	V	A	F	A	A	C	T	L	A	R	Q	I	F	E	.	S	L	S	T	V	T	V	L	L	V	G	.	A	G	E	T	I	E	L	V	A	R	H	L	R	E	H	K	V	Q	K	M	I	I	A	N	R	T	R	E	R	A	Q	I	L	A	D
Query Conservation																																		.												.
Alig confidence														.																				.												.																		.
Template Conservation														.																																																		.
Template Sequence		F	G	P	F	R	V	S	C	M	L	D	S	.	N	G	S	N	T	T	A	A	A	G	V	A	L	V	V	K	A	A	G	G	S	V	K	G	K	K	A	V	V	L	A	G	T	G	P	V	G	M	R	S	A	A	L	L	A	G	E	G	A	.	E	V	V	L	C	G	R	K	L	D	K	A	Q	A	A	A	D
Template Known Secondary structure		B	T	T	B								G	.	G	G																T	T	S			T	T							T	T	T	S													T	T		.							S	S
Template Predicted Secondary structure														.																																																		.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		225	.					.	.	.	230	.	.	.						.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure				.	.	.	.								.	.	.	.	.																																															.
Query SS confidence				.	.	.	.								.	.	.	.	.																																															.
Query Sequence		E	V	.	.	.	.	G	A	E	V	I	A	L	.	.	.	.	.	S	D	I	D	E	R	L	R	E	A	D	I	I	I	S	S	T	A	S	P	L	P	I	I	G	K	G	M	V	E	R	A	L	K	S	R	R	N	Q	P	M	L	L	V	D	I	.	A	V	P	R	D	V	E	P	E	V	G	K	L	A	N
Query Conservation				.	.	.	.								.	.	.	.	.																																															.
Alig confidence				.	.	.	.								.	.	.	.	.																																	.	.	.	.	.										.
Template Conservation																																																				.	.	.	.	.
Template Sequence		S	V	N	K	R	F	K	V	N	V	T	A	A	E	T	A	D	D	A	S	R	A	E	A	V	K	G	A	H	F	V	F	T	A	G	A	I	G	L	E	L	L	P	Q	A	A	W	Q	N	E	.	.	.	.	.	S	S	I	E	I	V	A	D	Y	N	A	Q	P	P	L	G	I	G	G	I	D	A	T	D	K
Template Known Secondary structure								T										S								T	T	T		S								T	T				B							T		.	.	.	.	.	T	T										S	S	S		S	B	T	T			T	T
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.						.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		295	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	E	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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