Job Description P0A6X1 Confidence 100.00% Date Thu Jan 5 11:04:08 GMT 2012 Rank 1 Aligned Residues 396 % Identity 34% Template c1gpjA_ PDB info PDB header:reductase Chain: A: PDB Molecule:glutamyl-trna reductase; PDBTitle: glutamyl-trna reductase from methanopyrus kandleri Resolution 1.95 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		M	T	.	L	L	A	L	G	I	N	H	K	T	A	P	V	S	L	R	E	R	V	S	F	S	P	D	K	L	D	Q	A	L	D	S	L	L	A	Q	P	M	V	Q	G	G	V	V	L	S	T	C	N	R	T	E	L	Y	L	S	V	E	E	Q	D	N	L	Q	E	A	L	I	R	W	L	C	D	Y	H	N	L
Query Conservation				.
Alig confidence				.																										.	.	.																																			.	.	.	.	.	.							.	.	.
Template Conservation																														.	.	.																																			.	.	.	.	.	.							.	.	.
Template Sequence		M	E	D	L	V	S	V	G	I	T	H	K	E	A	E	V	E	E	L	E	K	A	R	F	E	S	D	E	.	.	.	A	V	R	D	I	V	E	S	F	G	L	S	G	S	V	L	L	Q	T	S	N	R	V	E	V	Y	A	S	G	A	R	D	R	A	.	.	.	.	.	.	E	E	L	G	D	L	.	.	.
Template Known Secondary structure			T	T								T	T	T	S									S				T	T	.	.	.										T		S								T	T								S		T	T			.	.	.	.	.	.						T	.	.	.
Template Predicted Secondary structure																														.	.	.																																			.	.	.	.	.	.							.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	E	D	L	R	K	S	L	Y	W	H	Q	D	N	D	A	V	S	H	L	M	R	V	A	S	G	L	D	S	L	V	L	G	E	P	Q	I	L	G	Q	V	K	K	A	F	A	D	S	Q	K	G	H	M	K	A	S	E	L	E	R	M	F	Q	K	S	F	S	V	A	K	R	V	R	T	E	T	D	I	G
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	I	H	D	D	A	W	V	K	R	G	S	E	A	V	R	H	L	F	R	V	A	S	G	L	E	S	M	M	V	G	E	Q	E	I	L	R	Q	V	K	K	A	Y	D	R	A	A	R	L	G	T	L	D	E	A	L	K	I	V	F	R	R	A	I	N	L	G	K	R	A	R	E	E	T	R	I	S
Template Known Secondary structure		.	.	.	.	T		T	T																		T	T	T	T	S	S	S	T	T																			T																								S	S	T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	A	V	S	V	A	F	A	A	C	T	L	A	R	Q	I	F	E	S	L	S	T	V	T	V	L	L	V	G	A	G	E	T	I	E	L	V	A	R	H	L	R	E	H	K	V	Q	K	M	I	I	A	N	R	T	R	E	R	A	Q	I	L	A	D	E	V	G	A	E	V	I	A	L	S	D	I	D	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	A	V	S	I	G	S	A	A	V	E	L	A	E	R	E	L	G	S	L	H	D	K	T	V	L	V	V	G	A	G	E	M	G	K	T	V	A	K	S	L	V	D	R	G	V	R	A	V	L	V	A	N	R	T	Y	E	R	A	V	E	L	A	R	D	L	G	G	E	A	V	R	F	D	E	L	V	D	H
Template Known Secondary structure			S			S														S			T	T							S																		S							S	S												T						G	G	G
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		L	R	E	A	D	I	I	I	S	S	T	A	S	P	L	P	I	I	G	K	G	M	V	E	R	A	L	K	S	R	.	R	N	Q	P	M	L	L	V	D	I	A	V	P	R	D	V	E	P	E	V	G	K	L	A	N	A	Y	L	Y	S	V	D	D	L	Q	S	I	I	S	H	N	L	A	Q	R	K	A	A	A
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		L	A	R	S	D	V	V	V	S	A	T	A	A	P	H	P	V	I	H	V	D	D	V	R	E	A	L	R	K	R	D	R	R	S	P	I	L	I	I	D	I	A	N	P	R	D	V	E	E	G	V	E	N	I	E	D	V	E	V	R	T	I	D	D	L	R	V	I	A	R	E	N	L	E	R	R	R	K	E	I
Template Known Secondary structure				T		S							S	S	S	S			B													S	S											S	S		S	B		T	T	G	G	G	S	T	T																						T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	A	E	T	I	V	A	Q	E	T	S	E	F	M	A	W	L	R	A	Q	S	A	S	E	T	I	R	E	Y	R	S	Q	A	E	Q	V	R	D	E	L	T	A	K	A	L	A	A	L	E	Q	G	G	D	A	Q	A	I	M	Q	D	L	A	W	K	L	T	N	R	L	I	H	A	P	T	K	S	L	Q	Q
Query Conservation
Alig confidence																																																				.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		P	K	V	E	K	L	I	E	E	E	L	S	T	V	E	E	E	L	E	K	L	K	E	R	R	L	V	A	D	V	A	K	S	L	H	E	I	K	D	R	E	L	E	R	A	L	R	R	L	K	.	.	.	.	.	.	T	V	L	Q	D	F	A	E	A	Y	T	K	R	L	I	N	V	L	T	S	A	I	M	E
Template Known Secondary structure																																																S		S		.	.	.	.	.	.				T	T																			S
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.							.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	R	D	G	D	N	E	R	L	N	I	L	R	D	S	L	G	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	D	E	Y	R	R	A	A	S	R	A	L	R	R	A	S	E	L	N
Template Known Secondary structure		S		T	T	T	T	T													T
Template Predicted Secondary structure
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.