Job Description P0A6X1 Confidence 97.10% Date Thu Jan 5 11:04:08 GMT 2012 Rank 353 Aligned Residues 220 % Identity 14% Template c1bvuF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:protein (glutamate dehydrogenase); PDBTitle: glutamate dehydrogenase from thermococcus litoralis Resolution 2.50 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	M	K	A	S	E	L	E	R	M	F	Q	K	S	F	S	V	A	K	R	V	R	T	E	T	D	I	G	A	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	V	A	F	A	A	C	T	L	A	R	Q	I	F	E	S	L	S	T	V	T	V	L	L	V	G	A	G	E	T	I	E	L
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	T	N	P	Q	I	M	A	W	M	M	D	E	Y	E	T	I	S	R	R	K	D	P	S	F	G	V	I	T	G	K	P	P	S	V	G	G	I	V	A	R	M	D	A	T	A	R	G	A	S	Y	T	V	R	E	A	A	K	A	L	G	M	D	L	K	G	K	T	I	A	I	Q	G	Y	G	N	A	G	Y	Y
Template Known Secondary structure		T																		T	T	S	S		G	G	G	S			S			G	G	G	T			S	S	T	T	T																	T	T				T	T									S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		197	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.																		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	R	H	L	R	E	H	.	K	V	Q	K	M	I	I	A	N	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	R	A	Q	I	L	A	D	E	V	G	A	E	V	I	A	L	S	D	I	D	E	R	L	R	E	A	D	I	I	I	S	S	T	A	S	P	L	P	I	I	G
Query Conservation										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.									.	.
Template Conservation																																																															.	.									.	.
Template Sequence		M	A	K	I	M	S	E	E	Y	G	M	K	V	V	A	V	S	D	T	K	G	G	I	Y	N	P	D	G	L	N	A	D	E	V	L	A	W	K	K	K	T	G	S	V	K	D	F	P	G	A	T	N	I	T	N	E	E	L	L	E	L	.	.	E	V	D	V	L	A	P	S	.	.	A	I	E	E	V	I	T
Template Known Secondary structure									T	T										T	T						T	T															S	S	S	T	T		T	T	S										T	S	.	.			S						.	.	S		S	S		B
Template Predicted Secondary structure																																																															.	.									.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.			.	.	.	.	.	300	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.				.	.	.	.	.	.	.											300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																				.	.	.								.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence																																				.	.	.								.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		K	G	M	V	E	R	A	L	K	S	R	R	N	Q	P	M	L	L	V	D	I	A	V	P	R	D	V	E	P	E	V	G	K	L	.	.	.	A	N	A	Y	L	Y	S	.	.	.	.	.	.	.	.	.	.	V	D	D	L	Q	S	I	I	S	H	N	L	A	.	.	Q	R	K	A	A	A	V	E	A	E	T
Query Conservation																																				.	.	.								.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence												.	.	.	.	.	.										.									.	.	.								.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation												.	.	.	.	.	.										.
Template Sequence		K	K	N	A	D	N	I	K	A	K	.	.	.	.	.	.	I	V	A	E	L	A	N	G	P	.	T	T	P	E	A	D	E	I	L	Y	E	K	G	I	L	I	I	P	D	F	L	C	N	A	G	G	V	T	V	S	Y	F	E	W	V	Q	N	I	T	G	D	Y	W	T	V	E	E	T	R	A	K	L	D	K
Template Known Secondary structure						T	T				S	.	.	.	.	.	.						S	S			.	B											T	T										T
Template Predicted Secondary structure												.	.	.	.	.	.										.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.							.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	A	Q	E	T	S	E	F	M	A	W	L	R	A	Q	S	A	S	E	T	I	R	E	Y	R	S	Q	A	E	Q	V	R	D	E	L	T	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	M	T	K	A	F	W	D	V	Y	N	T	H	K	E	K	N	I	N	M	R	D	A	A	Y	V	V	A	V	S	R	V	Y	Q	A	M	K	D	R
Template Known Secondary structure																		T																						T
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions