 |
Job Description | P0A6X1 | Confidence | 98.63% | Date | Thu Jan 5 11:04:08 GMT 2012 |
Rank | 64 | Aligned Residues | 102 |
% Identity | 17% | Template | c1a4iB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase / |
PDBTitle: human tetrahydrofolate dehydrogenase / cyclohydrolase
|
Resolution | 1.50 Å |
|
 |
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | |
. | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | F | A | A | C | T | L | A | R | Q | I | F | E | S | L | S | T | V | T | V | L | L | V | G | A | G | E | . |
T | I | E | L | V | A | R | H | L | R | E | H | K | V | Q | K | M | I | I | A | N | R | T | R | E | R | A | Q | I | L | A | D | E | V | G | A | E | V | I | A | L | S | D | I | D | E | R | L | R | E | A | D |
Query Conservation |   |
  |
|   |
|
|   |
|
|   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|
|
|
|   | . |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|
|   |   |   |   |
|   |
|   |
|
|   |
|
|
|
|
|
|
|   |   |
|
|   |
|
|
|   |
|
|   |   |   |   |
|
|
|
|
|   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |
|
|
Template Sequence |   |
P | K | G | C | L | E | L | I | K | E | T | G | V | P | I | A | G | R | H | A | V | V | V | G | R | S | K | I | V | G | A | P | M | H | D | L | L | L | W | N | N | A | T | V | T | T | C | H | S | K | T | A | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | D | E | E | V | N | K | G | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
|
|
|
| T | T |
|  |  |  |  |  |
|
|
| T | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| T | T |
| S | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | T | T |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 210 |
  |
  |   |
245 | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | |
. | . | . | 290 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
| . |
|  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
| . |
|
|
|
|
|
|
|
|
Query Sequence |   |
I | I | I | S | S | T | A | S | P | L | P | I | I | G | K | G | M | V | E | R | A | L | K | S | R | R | N | Q | P | M | L | L | V | D | I | A | V | P | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | V | E | . |
P | E | V | G | K | L | A | N |
Query Conservation |   |
|
|
|
|
|
|   |
|   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
| . |
|   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |   |   |   | . |
|   |   |   |   |
|
|   |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |
Template Sequence |   |
I | L | V | V | A | T | G | Q | P | E | M | . |
V | K | G | E | W | I | K | P | G | A | . |
. |
. |
. |
. |
. |
. |
. |
I | V | I | D | C | G | I | N | Y | V | P | D | D | K | K | P | N | G | R | K | V | V | G | D | V | A | Y | D | E | A | K | E | R | A | S |
Template Known Secondary structure |   |
 |  |  |  |
|
| S |
| T | T |
| . | B |
| G | G | G | S |
| T | T |
| . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |  |
| T | T | S | T | T | S |  |  |  |  |
| S | B |
|  |  |  |  | T | T | T |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
| . |
|
|  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
211 | . | . | . | . | . | . | . | . | 220 | . | |
. | . | . | . | . | . | . | . | 230 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|