Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC19
Confidence1.92%DateThu Jan 5 11:16:56 GMT 2012
Rank63Aligned Residues47
% Identity9%Templated1doqa_
SCOP infoSAM domain-like C-terminal domain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90...
Predicted Secondary structure 
















Query SS confidence 














































Query Sequence  TSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREHHWV
Query Conservation    


  



  
   
        
 


 

  
   

    
Alig confidence 














































Template Conservation      
   
  
 

 
  
 
   

 

 

   
   
  
 
 
Template Sequence  QEEELDLPLEELGLSTRVLHSLKEEGIESVRALLALNLKDLKNIPGI
Template Known Secondary structure 

SS



T

TT

SS
TTSTT
Template Predicted Secondary structure 

















Template SS confidence 














































   248.250.........260.........270.........280.........290....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions