Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE60
Confidence3.55%DateThu Jan 5 11:22:35 GMT 2012
Rank26Aligned Residues20
% Identity20%Templatec3cw1D_
PDB info PDB header:splicingChain: D: PDB Molecule:small nuclear ribonucleoprotein sm d3; PDBTitle: crystal structure of human spliceosomal u1 snrnp
Resolution5.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.......
Predicted Secondary structure 






Query SS confidence 



















Query Sequence  MLRGKYVAFVLMGESFLRSP
Query Conservation 



















Alig confidence 



















Template Conservation   


  
  
 


 
  

Template Sequence  YIRGCKIRFLILPDMLKNAP
Template Known Secondary structure 
GGG





S

Template Predicted Secondary structure 







Template SS confidence 



















   62.......70.........80.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions