Job Description P0ABC9 Confidence 7.01% Date Thu Jan 5 11:15:11 GMT 2012 Rank 76 Aligned Residues 210 % Identity 13% Template d1rh5a_ SCOP info Preprotein translocase SecY subunit Preprotein translocase SecY subunit Preprotein translocase SecY subunit Resolution 3.20

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.										.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	D	L	S	H	S	R	E	K	D	K	I	N	P	V	V	F	Y	T	S	A	G	L	I	L	L	F	S	L	T	.	.	.	.	.	.	.	.	.	T	I	L	F	R	D	F	S	A	L	W	I	G	R	T	L	D	W	V	S	K	T	F	G	W	Y	Y	L	L	A	A	T	L	Y	I	V	F	V	V	C
Query Conservation																																	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.																																							.	.
Template Conservation																																																																																.	.
Template Sequence		I	P	E	V	E	L	P	V	K	E	I	T	F	K	E	K	L	K	W	T	G	I	V	L	V	L	Y	F	I	M	G	C	I	D	V	Y	T	A	G	A	Q	I	P	A	I	F	E	F	W	Q	T	I	T	A	S	R	I	G	T	L	I	T	L	G	I	G	P	I	V	T	A	G	I	I	M	Q	L	L	.	.
Template Known Secondary structure		S							S	S																						T	T	S	B				S	S					S			T	T						T			T	T	B	T	T	T	T	T	T														.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		I	A	C	S	R	F	G	S	V	K	L	G	P	E	Q	S	K	P	E	F	S	L	L	S	.	W	A	A	M	L	F	A	A	G	I	G	I	D	L	M	F	F	S	V	A	E	P	V	T	Q	Y	M	Q	P	P	E	G	A	G	Q	T	I	E	A	A	R	Q	A	M	V	W	T	L	F	H	Y	G	L	T	G
Query Conservation																										.
Alig confidence		.																								.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	V	G	S	G	I	I	Q	M	D	L	S	I	P	E	N	R	A	L	F	Q	G	C	Q	K	L	L	S	I	I	M	C	F	V	E	A	V	L	F	V	G	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	G	I	L	T
Template Known Secondary structure		.				T	T	S					S	S																													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure		.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																																.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		W	S	M	Y	A	L	M	G	M	A	L	G	Y	F	S	Y	R	Y	N	L	P	L	T	I	R	S	A	L	Y	P	I	F	G	K	R	I	N	G	P	.	I	G	H	S	V	D	I	A	A	V	I	G	T	I	F	G	I	A	T	T	L	G	I	G	V	V	Q	L	N	Y	G	L	S	V	L	F	D	I	P	D
Query Conservation																																									.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	L	A	F	L	V	I	I	Q	.	.	.	.	.	.	.	.	.	.	.	I	A	F	G	S	I	I	L	I	Y	L	D	E	I	V	S	K	Y	G	I	G	S	G	I	G	L	F	I	A	A	G	V	S	Q	T	I	F	V	G	A	L	G	P	E	G	Y	L	W	K	F	L	N	S	L	I	Q	G	V	P
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.																			S	S	S																					S	T	T										T	T	T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.												.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	A	A	K	A	A	L	I	A	L	S	V	I	I	A	T	I	S	V	T	S	G	V	D	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	E	Y	I	A	P	I	I	G	T	I	I	V	F	L	M	V	V	Y	A	E	C	M	R	V
Template Known Secondary structure			G	G	G	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions