 |
| Job Description | P0ABC9 | | Confidence | 15.64% | Date | Thu Jan 5 11:15:11 GMT 2012 |
| Rank | 22 | Aligned Residues | 65 |
| % Identity | 18% | Template | d1kf6d_ |
| SCOP info | Heme-binding four-helical bundle
| Fumarate reductase respiratory complex transmembrane subunits
| Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
|
| Resolution | 2.70 |
|
| | |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
|
|
|
|
|
|
|
|
|
|
|  | | | | | | . | . | . | . | . | . | . | . | . | | | | | | | | | | | | | | |
| | | | | | . | . | . | . | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
L | S | H | S | R | E | K | D | K | I | N | P | V | V | F | Y | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | A | G | L | I | L | L | F | S | L | T | T | I | L | F | R | D | F | S | A | . |
. |
. |
. |
L | W | I | G | R | T | L | D | W | V | S | K | T | F | G | W | Y | Y | L | L | A | A | T | L | Y | I | V | F | V |
| Query Conservation | |
| | | | | |
| | | | | | |
|
| | | . | . | . | . | . | . | . | . | . |
| | |
|
| | | | | | | |
| | |
| | | | | . | . | . | . | | | | | | | | | |
| | | |
|
|
| |
| |
| | | | | | |
|
| |
| Alig confidence | |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | |
|
|
| . |
|
| |
|
|
| |
|
|
|
|
|
|
|
|
| |
|
|
| | |
|
|
|
|
| | |
|
|
|
|
| |
| |
| | | | | | |
| | |
| |
|
|
| | | |
|
| | | |
|
| | |
| |
|
|
|
|
|
| Template Sequence | |
M | I | N | P | N | P | K | . |
R | S | D | E | P | V | F | W | G | L | F | G | A | G | G | M | W | S | A | I | I | A | P | V | M | I | L | L | V | G | I | L | L | P | L | G | L | F | P | G | D | A | L | S | Y | E | R | V | L | A | F | A | Q | S | F | I | G | R | V | F | L | F | L | M | I | V | L | P | L | W | C |
| Template Known Secondary structure | |
|
|
| S | S |
|
| . |
|
| S | | | | | | | | | | | | | | | | | | T | | | | | | | | | | T | T | G | G | G | T |
| S | S | T | T | T | T | S | | | | | | | | | T | S | | | | | | | | | | | | | | | | | |
| Template Predicted Secondary structure | |
|
|
|
|
| | | . | |
|
|
|
|
|
| | | | | |
|
| | | | | | | | | | | | | | | | | | | | | | | |
|
|
|
|
|
|
| | | | | | | | | | | | | | | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
0 | . | . | . | . | . | . | |
. | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
