Job Description P0ABC9 Confidence 9.46% Date Thu Jan 5 11:15:11 GMT 2012 Rank 39 Aligned Residues 54 % Identity 15% Template c2ksnA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ubiquitin domain-containing protein 2; PDBTitle: solution structure of the n-terminal domain of dc-ubp/ubtd2 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	E	E	V	A	Q	E	L	R	L	R	G	A	Y	V	E	L	K	S	L	P	P	E	E	G	Q	Q	L	G	H	L	D	L	L	V	H	M	G	E	E	Q	N	F	V	Y	Q	I	W	P	Q	Q	Y	S	V	P	G	F	T	Y	R	A	R
Query Conservation
Alig confidence														.	.											.	.	.	.	.	.														.
Template Conservation														.	.											.	.	.	.	.	.														.
Template Sequence		A	L	K	A	A	A	H	A	F	E	S	N	.	.	D	H	E	L	A	Q	A	I	I	D	.	.	.	.	.	.	G	A	N	I	T	L	P	H	G	A	L	T	E	.	C	Y	D	E	L	G	N	R	Y	Q	L	P	V	Y	C	L	A	P	P
Template Known Secondary structure												T	T	.	.											.	.	.	.	.	.			S		B		S	S			S	S		.				T	T	T							G	G	G	T			S
Template Predicted Secondary structure														.	.											.	.	.	.	.	.														.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.							.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions