Job Description P0ABC9 Confidence 6.61% Date Thu Jan 5 11:15:11 GMT 2012 Rank 100 Aligned Residues 67 % Identity 18% Template c1k8wA_ PDB info PDB header:lyase/rna Chain: A: PDB Molecule:trna pseudouridine synthase b; PDBTitle: crystal structure of the e. coli pseudouridine synthase2 trub bound to a t stem-loop rna Resolution 1.85 Å

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		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580										.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.
Query Sequence		E	E	V	A	Q	E	L	R	L	R	G	A	Y	V	E	L	K	S	L	P	P	E	E	G	Q	.	.	.	.	.	.	.	.	.	Q	L	G	H	L	D	L	L	V	H	M	G	E	E	Q	N	F	V	Y	Q	I	W	P	Q	Q	Y	S	V	P	G	F	T	Y	R	A	R	S	G	K	S	T	Y	Y	R
Query Conservation																											.	.	.	.	.	.	.	.	.
Alig confidence											.	.															.	.	.	.	.	.	.	.	.
Template Conservation											.	.
Template Sequence		E	Q	L	A	A	A	L	D	T	.	.	F	R	G	D	I	E	Q	I	P	S	M	Y	S	A	L	K	Y	Q	G	K	K	L	Y	E	Y	A	R	Q	G	I	E	V	P	R	E	A	R	P	I	T	V	Y	E	L	L	F	I	R	H	E	G	N	E	L	E	L	E	I	H	C	S	K	G	T	Y	I	R
Template Known Secondary structure										T	.	.	T	S									S	S	S					T	T									T	T																						T	T										T	T
Template Predicted Secondary structure											.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions