Return to main results Retrieve Phyre Job Id

Job DescriptionP0A847
Confidence21.90%DateThu Jan 5 11:06:50 GMT 2012
Rank166Aligned Residues123
% Identity15%Templated1vc4a_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180.........190..
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  NPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSLRWAKRSRERFDSLGNKNALFGIIQGSVYE
Query Conservation            


     
  
 


   

  
      
   


 

  
                
   



   
Alig confidence 


















































...................









Template Conservation 


 
 
   

   
      

 






   
 

   
  

  
 ...................



 




Template Sequence  SPSEGLIREVDPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAVD. . . . . . . . . . . . . . . . . . . LPLLRKDFVV
Template Known Secondary structure 
TTT



S

TT
S


SSS




...................S
S


Template Predicted Secondary structure 
























...................






Template SS confidence 















































































   56...60.........70.........80.........90.........100...... ...110......
 
   193......200.........210.........220.........230.........240.........250.........260...
Predicted Secondary structure 

























Query SS confidence 






































































Query Sequence  DLRDISVKGLVDIGFDGYAVGGLAVGEPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMF
Query Conservation 


  
   
      
  


             
      

  


 
 
 
 
  

  
  


 
Alig confidence 



..
































.......
























Template Conservation 
  
..
  
   


 



   
   
 

   
  
.......

  



    
   
   

  
Template Sequence  DPFM. . LEEARAFGASAALLIVALLGELTGAYLEEARRL. . . . . . . GLEALVEVHTERELEIALEAGAEVL
Template Known Secondary structure  S..TT
SGGG.......T

ST
S
Template Predicted Secondary structure 
..









.......








Template SS confidence 






































































   117..120 .........130.........140.........150... ......160.........170........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions