Return to main results Retrieve Phyre Job Id

Job DescriptionP0A847
Confidence80.27%DateThu Jan 5 11:06:50 GMT 2012
Rank38Aligned Residues111
% Identity18%Templatec3cprB_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthetase; PDBTitle: the crystal structure of corynebacterium glutamicum2 dihydrodipicolinate synthase to 2.2 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   188.190.........200.........210..... ....220.........230.........240... ......250.........260...
Predicted Secondary structure 










...










.







Query SS confidence 



























. . .



























.



















Query Sequence  GSVYEDLRDISVKGLVDIGFDGYAVGGL. . . AVGEPKADMHRILEHVCPQIPADKPRYL. MGVGKPEDLVEGVRRGIDMF
Query Conservation 

   


  
   
      
  


 ...            
      

  


 
. 
 
 
  

  
  


 
Alig confidence 



























...



























.














.....
Template Conservation 
 

       
  

  

 

 
 




   

  

  
             

 

   
    
  
  .....
Template Sequence  GDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEA. . . . .
Template Known Secondary structure  S
B
TT

SSTTTTTTTS
TTTS


SS.....
Template Predicted Secondary structure 
























.....
Template SS confidence 















































































   32.......40.........50.........60.........70.........80.........90.........100......
 
   264.....270.........280.........290.........300.......
Predicted Secondary structure 























Query SS confidence 











































Query Sequence  DCVMPTRNARNGHLFVTDGVVKIRNAKYKSDTGPLDPECDCYTC
Query Conservation 
   
   
  
  
       
       
  

   
 
  
Alig confidence  ....







































Template Conservation  ....
   


 
 
 

     
   
      

 
   

 
Template Sequence  . . . . AASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPIC
Template Known Secondary structure  ....TT
S


SS




S
Template Predicted Secondary structure  ....
















Template SS confidence 











































   107..110.........120.........130.........140......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions