 |
Job Description | P0A847 | Confidence | 47.74% | Date | Thu Jan 5 11:06:50 GMT 2012 |
Rank | 118 | Aligned Residues | 63 |
% Identity | 24% | Template | c2yzrB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:pyridoxal biosynthesis lyase pdxs; |
PDBTitle: crystal structure of pyridoxine biosynthesis protein from2 methanocaldococcus jannaschii
|
Resolution | 2.30 Å |
|
 |
  |   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | |
|
|
. | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 270 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Y | A | V | G | G | L | A | V | G | E | P | K | A | D | M | H | R | I | L | E | H | V | C | P | Q | I | P | A | D | K | P | R | Y | L | M | . |
. |
. |
G | V | G | K | P | E | D | L | V | E | G | V | R | R | G | I | D | . |
. |
. |
. |
. |
. |
. |
M | F | D | C | V | M | P | T | R | N | A | R |
Query Conservation |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|   |
|   | . | . | . |
|   |
|   |
|   |   |
|
|   |   |
|   |   |
|
|
| . | . | . | . | . | . | . |   |
|
|   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |
|
|   |   |   | . | . |   |
|
|
|
|
|   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |   |   |
|   |
Template Sequence |   |
E | P | I | Y | E | G | F | T | L | A | E | I | I | D | G | L | Y | E | V | L | L | E | V | K | K | L | . |
. |
G | R | L | P | V | V | N | F | A | A | G | G | V | A | T | P | A | D | A | A | L | M | M | Q | L | G | S | D | G | V | F | V | G | S | G | I | F | K | S | E | N | P | L | E | R | A | R |
Template Known Secondary structure |   |
S |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | T | S |
| S | S |  |  |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | S |  |  |  |  | T | S | S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
213 | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | |
|
. | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|