Job Description P0A847 Confidence 77.35% Date Thu Jan 5 11:06:50 GMT 2012 Rank 51 Aligned Residues 139 % Identity 18% Template c2fptA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase, mitochondrial; PDBTitle: dual binding mode of a novel series of dhodh inhibitors Resolution 2.40 Å

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		124	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure														.	.																				.
Query SS confidence														.	.																				.
Query Sequence		P	E	K	S	M	E	I	Q	Y	D	L	G	.	.	S	D	I	V	M	I	F	D	E	C	T	P	Y	P	A	D	W	D	Y	.	A	K	R	S	M	E	M	S	L	R	W	A	K	R	S	R	E	R	F	D	S	L	G	N	K	N	A	L	F	G	I	I	Q	G	S	V	Y	E	D	L	R	D	I	S	V	K
Query Conservation														.	.																				.
Alig confidence														.	.																				.																															.
Template Conservation																																																																		.
Template Sequence		A	E	D	Y	A	E	G	V	R	V	L	G	P	L	A	D	Y	L	V	V	N	V	S	S	P	N	T	A	G	L	R	S	L	Q	G	K	A	E	L	R	R	L	L	T	K	V	L	Q	E	R	D	G	L	R	R	V	H	R	P	A	V	L	V	K	.	I	A	P	D	L	T	S	Q	D	K	E	D	I	A	S
Template Known Secondary structure													G	G	G		S									T	T	S	T	T	S	G	G	G	G	S																	T	S		G	G	G								.			S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.																				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		G	L	V	D	I	G	F	D	G	Y	A	V	G	G	L	A	V	G	E	P	K	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	H	R	I	L	E	H	V	C	P	Q	I	P	A	D	K	P	R	Y	L	M	G	.	V	G	K	P	E	D	L	V	E	G	V	R	R	G	I
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		V	V	K	E	L	G	I	D	G	L	I	V	T	N	T	T	V	S	R	P	A	G	L	Q	G	A	L	R	S	E	T	G	G	L	S	G	K	P	L	R	D	L	S	T	Q	T	I	R	E	M	Y	A	L	T	Q	G	R	V	P	I	I	G	V	G	G	V	S	S	G	Q	D	A	L	E	K	I	R	A	G	A
Template Known Secondary structure							T										B	S				T	T				T	T	T	T	S	S	S																						T	T	T		S						S	S			S											T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		261	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	V
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		351	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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