Job Description P0A847 Confidence 100.00% Date Thu Jan 5 11:06:50 GMT 2012 Rank 1 Aligned Residues 360 % Identity 49% Template c2ashB_ PDB info PDB header:transferase Chain: B: PDB Molecule:queuine trna-ribosyltransferase; PDBTitle: crystal structure of queuine trna-ribosyltransferase (ec 2.4.2.29)2 (trna-guanine (tm1561) from thermotoga maritima at 1.90 a resolution Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	E	L	D	T	T	D	G	R	A	R	R	G	R	L	V	F	D	R	G	V	V	E	T	P	C	F	M	P	V	G	T	Y	G	T	V	K	G	M	T	P	E	E	V	E	A	T	G	A	Q	I	I	L	G	N	T	F	H	L	W	L	R	P	G	Q	E	I	M	K	L	H	G	D	L	H	D	F	M	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	E	V	K	K	T	F	G	K	A	R	L	G	V	M	K	L	H	H	G	A	V	E	T	P	V	F	M	P	V	G	T	N	A	S	V	K	L	L	T	P	R	D	L	E	E	A	G	A	E	I	I	L	S	N	T	F	H	L	M	L	K	P	G	V	E	I	I	K	L	H	R	G	L	H	N	F	M	G
Template Known Secondary structure										T	T									T	T						S							S	S	S	S		T	T										T		S												T	T								T	T	S						T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	K	G	P	I	L	T	D	S	G	G	F	Q	V	F	S	L	G	D	I	R	K	I	T	E	Q	G	V	H	F	R	N	P	I	N	G	D	P	I	F	L	D	P	E	K	S	M	E	I	Q	Y	D	L	G	S	D	I	V	M	I	F	D	E	C	T	P	Y	P	A	D	W	D	Y	A	K	R	S	M	E	M
Query Conservation
Alig confidence																					.																																															.	.
Template Conservation																					.																																															.	.
Template Sequence		W	K	R	P	I	L	T	D	S	G	G	F	Q	V	F	S	L	P	K	.	I	R	I	D	D	E	G	V	V	F	R	S	P	I	D	G	S	K	V	F	L	N	P	E	I	S	M	E	V	Q	I	A	L	G	S	D	I	C	M	V	F	D	H	C	P	V	.	.	A	D	Y	E	E	V	K	E	A	T	E	R
Template Known Secondary structure				S							S							S	S	S	.					S	S							T	T	T																			T		S											.	.
Template Predicted Secondary structure																					.																																															.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	R	W	A	K	R	S	R	E	R	F	D	S	L	G	N	K	N	A	L	F	G	I	I	Q	G	S	V	Y	E	D	L	R	D	I	S	V	K	G	L	V	D	I	G	F	D	G	Y	A	V	G	G	L	A	V	G	E	P	K	A	D	M	H	R	I	L	E	H	V	C	P	Q	I	P	A	D	K	P	R
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		T	Y	R	W	A	L	R	S	K	K	A	F	K	T	E	.	.	N	Q	A	L	F	G	I	V	Q	G	G	I	Y	P	D	L	R	R	E	S	A	L	Q	L	T	S	I	G	F	D	G	Y	A	I	G	G	L	S	I	G	E	E	R	S	L	T	L	E	M	T	E	V	T	V	E	F	L	P	E	D	K	P	R
Template Known Secondary structure																S	.	.	S										T	T																		S						S		S	S	S	S															T	S		T	T	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	M	G	V	G	K	P	E	D	L	V	E	G	V	R	R	G	I	D	M	F	D	C	V	M	P	T	R	N	A	R	N	G	H	L	F	V	T	D	G	V	V	K	I	R	N	A	K	Y	K	S	D	T	G	P	L	D	P	E	C	D	C	Y	T	C	R	N	Y	S	R	A	Y	L	H	H	L	D	R	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	F	M	G	G	G	S	P	E	L	I	L	E	L	V	D	R	G	V	D	M	F	D	S	V	F	P	T	R	I	A	R	H	G	T	A	L	T	W	N	G	K	L	N	L	K	A	S	Y	N	K	R	S	L	E	P	V	D	E	R	C	G	C	Y	T	C	K	N	F	T	R	S	Y	I	H	H	L	F	D	R
Template Known Secondary structure					S												T	T	T							S								T	T					T	T					T	T	S	G	G	G	T	T			S		S		T	T			S																	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	I	L	G	A	R	L	N	T	I	H	N	L	R	Y	Y	Q	R	L	M	A	G	L	R	K	A	I	E	E	G	K	L	E	S	F	V	T	D	F	Y	Q	R	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	V	L	G	Q	I	L	L	T	I	H	N	I	N	F	M	I	S	L	M	K	E	V	R	R	S	I	E	S	G	T	F	K	E	L	K	S	K	V	V	E	V	Y	S
Template Known Secondary structure		T																														T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions