Job Description P0A847 Confidence 100.00% Date Thu Jan 5 11:06:50 GMT 2012 Rank 3 Aligned Residues 332 % Identity 28% Template c1iq8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:archaeosine trna-guanine transglycosylase; PDBTitle: crystal structure of archaeosine trna-guanine2 transglycosylase from pyrococcus horikoshii Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	F	E	L	D	T	T	D	G	R	A	R	R	G	R	L	V	F	D	R	G	V	V	E	T	P	C	F	M	P	V	G	T	Y	G	T	V	K	G	M	T	P	E	E	V	E	A	T	G	A	Q	I	I	L	G	N	T	F	H	L	W	L	R	P	G	Q	E	I	M	K	L	H	G	D	L	H	D	F	M
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		L	K	F	E	I	K	A	R	D	G	A	G	R	I	G	K	L	E	V	N	G	K	K	I	E	T	P	A	I	M	P	V	V	N	P	K	Q	M	V	.	V	E	P	K	E	L	E	K	M	G	F	E	I	I	I	T	N	S	Y	I	I	Y	K	D	E	E	L	R	R	K	A	L	E	L	G	I	H	R	M	L
Template Known Secondary structure											T	T									T	T						S					B		B	T	T	B		S	.	S								T	T													T	S																T
Template Predicted Secondary structure																																									.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	W	K	G	P	I	L	T	D	S	G	G	F	Q	V	F	S	L	G	D	I	R	K	I	T	E	Q	G	V	H	F	R	N	P	I	N	G	D	P	I	F	L	D	P	E	K	S	M	E	I	Q	Y	D	L	G	S	D	I	V	M	I	F	D	E	C	T	P	Y	P	A	D	W	D	Y	A	K	R	S	M	E
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	N	G	I	I	E	V	D	S	G	S	F	Q	L	M	K	Y	G	S	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	N	R	E	I	I	E	F	Q	H	R	I	G	V	D	I	G	T	F	L	D	I	P	T	P	P	D	A	P	R	E	Q	A	V	K	E	L	E
Template Known Secondary structure		T			S							S	T	T					T	S			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S												T	T		S	B										T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.
Predicted Secondary structure																																																																												.	.	.
Query SS confidence																																																																												.	.	.
Query Sequence		M	S	L	R	W	A	K	R	S	R	E	R	F	D	S	L	G	N	K	N	A	L	F	G	I	I	Q	G	S	V	Y	E	D	L	R	D	I	S	V	K	G	L	V	D	I	G	F	D	G	Y	A	V	G	G	L	A	V	G	E	P	K	A	D	M	H	R	I	L	E	H	V	C	P	Q	.	.	.	I	P	A
Query Conservation																																																																												.	.	.
Alig confidence															.	.	.	.	.																																																									.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		I	T	L	S	R	A	R	E	A	E	E	I	K	.	.	.	.	.	E	I	P	M	N	A	T	I	Q	G	S	T	Y	T	D	L	R	R	Y	A	A	R	R	L	S	S	M	N	F	E	I	H	P	I	G	G	V	V	P	L	L	E	S	Y	R	F	R	D	V	V	D	I	V	I	S	S	K	M	A	L	R	P
Template Known Secondary structure															.	.	.	.	.		S						B			T	T															S			S	B					S							T	T															T	S		T
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	P	R	Y	L	M	G	V	G	K	P	E	D	L	V	E	G	V	R	R	G	I	D	M	F	D	C	V	M	P	T	R	N	A	R	N	G	H	L	F	V	T	D	G	V	V	K	I	R	N	A	K	Y	K	S	D	T	G	P	L	D	P	E	C	D	C	Y	T	C	R	N	Y	S	R	A	Y	L	H	H
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.
Template Sequence		D	R	P	V	H	L	F	G	A	G	H	P	I	V	F	A	L	A	V	A	M	G	V	D	L	F	D	S	A	S	Y	A	L	Y	A	K	D	D	R	Y	M	T	P	E	G	T	K	R	L	D	E	L	D	.	.	.	.	.	.	.	.	Y	F	P	C	S	C	P	V	C	S	K	Y	T	P	Q	E	L	R	E
Template Known Secondary structure		T	S					T	T			S	G	G	G							T	T							S								T	T					T	T					G	G	G		S	.	.	.	.	.	.	.	.	S					S	T	T	T	T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.									.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	R	C	N	E	I	L	G	A	R	L	N	T	I	H	N	L	R	Y	Y	Q	R	L	M	A	G	L	R	K	A	I	E	E	G	K	L	E	S	F	V	T	D	F	Y	Q	R	Q	G	R	E	V	P	P	L
Query Conservation
Alig confidence										.	.	.																																	.	.	.	.
Template Conservation										.	.	.																																	.	.	.	.
Template Sequence		M	P	K	E	E	R	T	R	.	.	.	L	L	A	L	H	N	L	W	V	I	K	E	E	I	K	R	V	K	Q	A	I	K	E	G	E	L	W	R	L	V	D	E	.	.	.	.	R	A	R	S	H	P	K	L
Template Known Secondary structure		S								.	.	.																								T									.	.	.	.		G	G	G
Template Predicted Secondary structure										.	.	.																																	.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.				.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.					.	.	.	.	.	340	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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