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Job DescriptionP62601
Confidence98.79%DateThu Jan 5 12:07:39 GMT 2012
Rank13Aligned Residues293
% Identity17%Templated2fbaa1
SCOP infoalpha/alpha toroid Six-hairpin glycosidases Glucoamylase
Resolution1.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   169170.........180.........190.........200.........210 .... ..
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Query Sequence  FSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIENYGHI. . . . . . PNGN. . . . . . . . . . . . . . . . . . . . . . . . . . RT
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Template Sequence  YYYQWTRDSAITFLTVLSELEDNNFNTTLAKAVEYYINTSYNLQRTSNPSGSFDDENHKGLGEPKFNTDGSAYTGAWGRP
Template Known Secondary structure 

STTT
TS
BTTB
TTSGGGGGGG


TTS
B

S

S

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   63......70.........80.........90.........100.........110.........120.........130.........140..
 
   217..220.........230...... ...240.........250.........260.........270........
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Query Sequence  YYLSRSQPPVFALMVELFEE. . . . . . . . . . . . . . . . . . DGVRGARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMPDG
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Template Sequence  . . . QNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYKNIIKPDLEYVIGYWDSTGFDLWEEN. . . . . . .
Template Known Secondary structure  ...BTTSTT

SSTT
TT
S
SSTTTS

TTS

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   143......150.........160.........170.........180.........190.........200.........210..
 
   279280.........290.........300.........310.........320.........330.........340.........350........
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Query Sequence  SLLNRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRDTGRLASIRTTQFIPIDLNAFLFKL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QGRHFFTS. . . . . . . . . . . . . . . . . . . . . . LVQQKA
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   213......220 ......
 
   359360.........370.........380.........390.. .......400. ........410.........420.....
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Query Sequence  ESAIANISALKGEKETEALFRQKASARRDAVNRY. . . LWDDENGIY. . . RDYDWRREQLALFSAAAIVPLYVG. . . . . . .
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Template Sequence  LAYAVDIAKSFDDGDFANTLSSTASTLESYLSGSDGGFVNTDVNHIVENPDLLQQNSRQGLDSATYIGPLLTHDIGESSS
Template Known Secondary structure  TT
STTT

TTTT
SSTTS

S

TS
TTS


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   227..230.........240.........250.........260.........270.........280.........290.........300......
 
   426...430.........440......... 450.........460.. .......470.........480......
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Query Sequence  . . . MANHEQADRLANAVRSRLLTPGGI. . . . . . . LASEYETGEQWDK. . . . . PNGWAPLQWMAIQGFKMYGDDLLG. . . .
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Template Sequence  TPFDVDNEYVLQSYYLLLEDNKDRYSVNSAYSAGAAIGRYPEDVYNGDGSSEGNPWFLATAYAAQVPYKLAYDAKSASND
Template Known Secondary structure 
S

TT

GGGTT
SS




S
TT

B
SSSBSS


BT

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   307..310.........320.........330.........340.........350.........360.........370.........380......
 
   487..490.........500.........510.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DEIARSWLKTVNQFYLEQHKLIEKYHIADGVPR
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Template Sequence  ITINKINYDFFNKYIVDLSTINSAYQSSDSVTIKSGSDEFNTVADNLVTFGDSFLQVILDHINDDGSLNEQLNRYTGYST
Template Known Secondary structure  GGGT

GGGT
TTGGGSS
TTSS
TTS


S
TTT

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   387..390.........400.........410.........420.........430.........440.........450.........460......
 
   520.........530.........540.....
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Query Sequence  EGGGGEYPLQDGFGWTNGVVRRLIGL
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Template Sequence  GAYS. . . . . . . . LTWSSGALLEAIRL
Template Known Secondary structure  SSTT........
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   467..470 .........480....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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