Job Description P62601 Confidence 99.89% Date Thu Jan 5 12:07:39 GMT 2012 Rank 7 Aligned Residues 324 % Identity 14% Template d1v7wa1 SCOP info alpha/alpha toroid Six-hairpin glycosidases Glycosyltransferase family 36 C-terminal domain Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.										.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.
Query Sequence		V	P	G	G	R	F	S	E	T	Y	Y	W	D	S	Y	F	T	M	L	G	L	A	E	S	G	R	E	D	L	L	K	C	M	A	D	N	F	A	W	M	I	E	N	Y	G	H	I	P	.	.	.	.	.	.	.	.	.	N	G	N	R	T	Y	Y	L	S	R	S	Q	P	P	V	F	A	L	M	V	E	L	F
Query Conservation																																																		.	.	.	.	.	.	.	.	.
Alig confidence																											.																							.	.	.	.	.	.	.	.	.
Template Conservation																											.
Template Sequence		I	E	V	G	G	R	T	G	L	G	Y	R	D	T	A	Q	D	A	I	S	V	P	H	A	N	.	P	E	M	T	R	K	R	I	V	D	L	L	R	G	Q	V	K	A	G	Y	G	L	H	L	F	D	P	D	W	F	D	P	I	H	G	I	K	D	T	C	S	D	D	H	L	W	L	I	P	T	I	C	K	Y
Template Known Secondary structure		S			S	S			S										T	T	S		T	T	T		.														T	B		T	T	S		B		S				G	G	G	G						G	G	G		B	S	S	G	G	G	G
Template Predicted Secondary structure																											.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
				235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	E	E	D	G	V	R	G	A	R	R	Y	L	D	H	L	K	M	E	Y	A	F	W	M	D	G	A	E	S	L	I	P	N	Q	A	Y	R	H	V	V	R	M	P	D	G	S	L	L	N	R	Y	W	D	D	R	D	T	P	R	D	E	S	W	L	E	D	V	E	T	A	K	H	S	G	R	P	P	N	E
Query Conservation		.	.
Alig confidence		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	M	E	T	G	E	T	S	F	F	D	Q	M	I	P	Y	A	D	G	G	E	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								G	G	G	G	G						T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.					340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence		V	Y	R	D	L	R	A	G	A	A	S	G	W	D	Y	S	S	R	W	L	R	D	T	G	R	L	A	.	.	.	.	S	I	R	T	T	Q	F	I	P	I	D	L	N	A	F	L	F	K	L	E	S	A	I	A	N	I	S	A	L	K	G	E	K	E	T	E	A	L	F	R	Q	K	A	S	A	R	R	D	A
Query Conservation																													.	.	.	.
Alig confidence																													.	.	.	.
Template Conservation
Template Sequence		V	Y	E	H	M	K	A	A	L	D	F	S	A	E	Y	V	G	Q	T	G	I	C	K	G	L	R	A	D	W	N	D	C	L	N	L	G	G	G	E	S	S	M	V	S	F	L	H	F	W	A	L	Q	E	F	I	D	L	A	K	F	L	G	K	D	Q	D	V	N	T	Y	T	E	M	A	A	N	V	R	E	A
Template Known Secondary structure																S	B		T	T	S		B				T		S	S	S	T	T																														T
Template Predicted Secondary structure
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.										.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.
Query Sequence		V	N	R	Y	L	W	D	D	E	N	G	I	Y	R	D	Y	.	.	.	.	.	.	.	.	.	D	W	R	R	E	Q	L	A	L	F	S	A	A	A	I	V	P	L	Y	V	G	M	A	N	H	E	Q	A	D	R	L	A	N	A	V	R	S	R	L	L	T	P	G	G	I	L	A	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	E	T	H	L	W	D	D	E	G	G	W	Y	I	R	G	L	T	K	N	G	D	K	I	G	T	A	Q	Q	Q	E	G	R	V	H	L	E	S	N	T	L	A	V	L	S	G	L	A	S	Q	E	R	G	E	Q	A	M	D	A	V	D	E	H	L	F	S	P	Y	G	L	H	L	N	A	P	S	F	S	T	P
Template Known Secondary structure						S			T	T	T	T								T	T	S				S		T	T		S	S														T	T		S																			T	T				S			S				S
Template Predicted Secondary structure
Template SS confidence
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.
									452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	S	E	Y	E	T	G	E	Q	W	D	K	P	N	G	W	A	P	L	Q	W	M	A	I	Q	G	F	K	M	Y	G	D	D	L	L	G	D	E	I	A	R	S	W	L	K	T	V	N	Q	F	Y	L	E	Q	H	K	L	I	E	K	Y	H	I	A	D	G	V	P	R	E	G	G	G	G
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.													.
Template Conservation																					.
Template Sequence		N	D	D	I	G	F	V	T	R	V	Y	Q	G	V	K	E	N	G	A	.	I	F	S	H	P	N	P	W	A	W	V	A	E	T	K	L	G	R	G	D	R	A	M	K	F	Y	D	A	L	N	P	Y	N	Q	N	D	I	I	E	K	R	I	A	E	P	Y	S	Y	V	Q	F	I	M	G	R	D	H	Q	D	H
Template Known Secondary structure			T	T	T		G	G	G	G	S		T	T	B	T	T	B	T	S	.			S	T	T											T	T														G	G	G	G	T	T							S		T	T	S								T	T	S	T	T	T
Template Predicted Secondary structure																					.
Template SS confidence
		622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640		.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	P	L	Q	D	G	F	G	W	T	N	G	V	V	R	R	L	I	G	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	A	N	H	P	W	L	T	G	T	S	G	W	A	Y	F	A	V	T	N	Y
Template Known Secondary structure		T						S	S		T												T
Template Predicted Secondary structure
Template SS confidence
		701	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions