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Job DescriptionP62601
Confidence99.32%DateThu Jan 5 12:07:39 GMT 2012
Rank12Aligned Residues302
% Identity19%Templated1ulva1
SCOP infoalpha/alpha toroid Six-hairpin glycosidases Bacterial glucoamylase C-terminal domain-like
Resolution2.42

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   158.160........ .170.........180.........190.........200...... ...210.. .......220. .....
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Query Sequence  LPQSYIVPGGR. . . . FSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIEN. YGHIPN. . . . GNRTYYLSR. . SQPPV
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Template Sequence  IPWGQAASAETHREGYHAVWARDMYQSVTALLAAGDEEAAARGVEWLFTYQQQPDGHFPQTSRVDGTIGQNGIQLDETAF
Template Known Secondary structure 
TTGGGS

SS


TT
SB
T
T

TTS


S
B
TTS
B




BT
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   311........320.........330.........340.........350.........360.........370.........380.........390
 
   227..230.........240.........250.........260.........270.........280.........290.........300......
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Query Sequence  FALMVELFEEDGVRGARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMPDGSLLNRYWDDRDTPRDESWLEDVETAKHS
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Template Sequence  PILLANQIGRTDAG. . . FYRNELKPAADYLVAAGPKTPQER. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T


...T
S
BSB
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   391........400.... .....410.........420........
 
   307..310.........320.........330.........340.........350.........360.........370.........380......
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Query Sequence  GRPPNEVYRDLRAGAASGWDYSSRWLRDTGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARR
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Template Sequence  . . . . . . . . . . . . WEETGGYSTSTL. . . . . . . . . . . . . . . . . . . . . . ASQIAALAAAADIAGKNGDAGSAAVYRATADEWQ
Template Known Secondary structure  ............TSS

B......................TT
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   429430.........440 .........450.........460.........470....
 
   387..390.........400......... 410.........420......... 430.........440..
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Query Sequence  DAVNRYLWDDENGIYRDYDWRRE. . . . . . . . . . . . . . . . . . . . . . QLALFSAAAIVPLYVGMANH. . EQADRLANAVRSR
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Template Sequence  RSTEKWMFTTNGPVGDGKYYLRISATGNPNDGATRDWGNGAGVHPENAVLDGGFLEFVRLGVKAPADPYVADSLAETDAS
Template Known Secondary structure  TSS
SSTTS

SSSS
TTS


STT

GGG

BGGGGTTSS
TT
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   475....480.........490.........500.........510.........520.........530.........540.........550....
 
   443. .....450.........460. ........470.........480.........490.........500.........510.
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Query Sequence  LL. . TPGGILASEYETGEQWD. . . . . . KPNGWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYLEQHKLIEKY. . .
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Template Sequence  ISQETPGGRMWHRYTYDGYGEKADGSPWD. GTGIGRLWPLLSGERGEYALANGQDALPYLETMHSAANAGYMIPEQVWDR
Template Known Secondary structure  TT
SBTT


S

TTS


S.S




B
TTT


TS
TT



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BB

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   555....560.........570.........580... ......590.........600.........610.........620.........630...
 
   512.......520.........530.........540....
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Query Sequence  . . . . . . . HIADGVPREGGGGEYPLQDGFGWTNGVVRRLIG
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Template Sequence  DEPTSYGHELGRSTGSASP. . . . . . . . LSWAMAQYVRLAA
Template Known Secondary structure  SS

SS


BTSB
SS
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   634.....640.........650.. .......660.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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