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Job DescriptionP62601
Confidence97.60%DateThu Jan 5 12:07:39 GMT 2012
Rank19Aligned Residues175
% Identity16%Templatec3qspB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: analysis of a new family of widely distributed metal-independent alpha2 mannosidases provides unique insight into the processing of n-linked3 glycans, streptococcus pneumoniae sp_2144 non-productive substrate4 complex with alpha-1,6-mannobiose
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   352.......360.........370.... .....380.........390........ .400.........410.... .....420
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Query Sequence  NAFLFKLESAIANISALKGEKET. . . EALFRQKASARRDAVNRYLWDDEN. . GIYRDYDWRREQLALF. . . . . . SAAAIV
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Template Sequence  NMFAVVVLGYVQEIFAALNLADSQSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYAFEVDGLGNASIMDDPNVPSLLAA
Template Known Secondary structure  T
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   230.........240.........250.........260.........270.........280.........290.........300.........
 
   421..... ...430.........440....... ..450.........460.........470.........480.........490.
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Query Sequence  PLYVGM. ANHEQADRLANAVRSRLLTPG. . . . . . . . GILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGDDLLGDEIAR
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Template Sequence  PYLGYCSVDDEVYQATRRTILSSE. NPYFYQGEYASGLGSSHTFYR. . . . . . YIWP. . IALSIQGLTTRDKAEKKFL. . .
Template Known Secondary structure  TTTTSS
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   310.........320.........330... ......340.........350.... .... .360.........370.......
 
   492.......500.........510.........520.........530.........540........
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Query Sequence  SWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGE
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Template Sequence  . . LDQLVACDGGTGVMHESFHVDDPTLYSREW. . . . . . . . FSWANMMFCELVLDYLD
Template Known Secondary structure  ..TSTTSSS

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   378.380.........390.........400....... ..410.........420....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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