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Job DescriptionP62601
Confidence100.00%DateThu Jan 5 12:07:39 GMT 2012
Rank3Aligned Residues381
% Identity17%Templatec3c67B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:uncharacterized protein ygjk; PDBTitle: escherichia coli k12 ygjk in a complexed with glucose
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   157..160...... ...170 .........180.........190.........200....... ..210..
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Query Sequence  ALPQSYIVPG. . . GRFS. . ETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIENY. . . . . . . . . GHIPN. . . . . . . . . .
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Template Sequence  AVKFNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFN. PDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPER
Template Known Secondary structure  TB
S

S
TT
TTT
TT
B
TTT
.TT


TT
SS
GGGTT


SBB
SS

GGG
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   300.........310.........320.........330...... ...340.........350.........360.........370........
 
   213......220.........230..... ....240.........250.........260.........270 .........280.....
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Query Sequence  . . GNRTYYLSRSQPPVFALMVELFE. . EDGVRGARRYLDHLKMEYAFWMDGAESLIPNQAYR. . . HVVRMPDGSLLNRYW
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Template Sequence  GGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFT
Template Known Secondary structure  TS

SS
B
S







S
TT
SS





TTTB
TT

B
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   379380.........390.........400.........410.........420.........430.........440.........450........
 
   286...290.........300.... .....310.........320.........330.. ....
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Query Sequence  DDRDTPRDESWLEDVETAK. . HSGRPPNEVYRDLRAGAASGWDYSSRWL. . . . . . . . . . . . . . . . . . . . . . . . . . . RDTG
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Template Sequence  VKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQD
Template Known Secondary structure  TT


SS
T
TT
GGGT


TT

GGGG



TT
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   459460.........470.........480.........490.........500.........510.........520.........530........
 
   337..340.........350.........360.........370.........380.........390.........400.........410..
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Query Sequence  RLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRDAVNRYLWDDENGIYRDYDWRREQLA. . . .
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Template Sequence  GTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCA
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S
TT
STTTT



SS

TTS
S
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   539540.........550.........560.........570.........580.........590.........600.........610........
 
   413......420.........430.........440.. .......450. ........460.........470........
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Query Sequence  . . . . . . . LFSAAAIVPLYVGMANHEQADRLANAVRSR. . LLTPGGILA. . . . . SEYETGEQWDKPNGWAPLQWMAIQGFK
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Template Sequence  GKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGR. VWVDQFWFGLKGME
Template Known Secondary structure  S
B
GGG


GGGGTT
S
T
TTTT

SS
S
SS
TT
TT

TT
TTTT
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   619620.........630.........640.........650.........660.........670.........680... ......690.......
 
   479480.........490.........500.........510.........520.........530.........540........
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Query Sequence  MYGDDLLGDEIARSWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGE
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Template Sequence  RYGYRDDALKLADTFFR. HAKGLTADGPIQENYNPLTGAQQGAPN. . . . . . . . FSWSAAHLYMLYNDFFR
Template Known Secondary structure  TT
.STTTTSSS


S
TTT

S
TT........
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   698.700.........710.... .....720.........730.........740. ........750........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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