Job Description P62601 Confidence 94.63% Date Thu Jan 5 12:07:39 GMT 2012 Rank 25 Aligned Residues 243 % Identity 12% Template c2rdyB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:bh0842 protein; PDBTitle: crystal structure of a putative glycoside hydrolase family2 protein from bacillus halodurans Resolution 2.03 Å

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		173	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																													.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure						.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Y	W	D	.	.	S	Y	F	T	M	L	G	L	A	E	S	G	R	E	D	L	L	K	C	M	A	D	N	F	A	W	M	I	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	H	I	P	N	G	N	R	T	Y	Y	L	S	R	S
Query Conservation						.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	T	L	N	I	N	A	E	X	N	Y	W	P	A	E	T	C	N	L	A	E	L	H	K	P	L	I	H	F	I	E	R	L	A	A	N	G	K	K	T	A	E	I	N	Y	G	A	R	G	W	V	A	H	H	N	A	D	L	W	G	Q	T	A	P	V	G	D	F	G	H	G	D	P	V	W	A	F	W	P	X
Template Known Secondary structure				T	T	T						T	T	T	T	T	T	T	T		G	G	G	G																									S	S					S				T	T				S			B	T	T	T	T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.									.
Query SS confidence															.	.									.
Query Sequence		Q	P	P	V	F	A	L	M	V	E	L	F	E	.	.	E	D	G	V	R	G	A	R	.	R	Y	L	D	H	L	K	M	E	Y	A	F	W	M	D	G	A	E	S	L	I	P	N	Q	A	Y	R	H	V	V	R	M	P	D	G	S	L	L	N	R	Y	W	D	D	R	D	T	P	R	D	E	S	W	L	E	D
Query Conservation															.	.									.
Alig confidence															.	.									.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	V	W	L	T	Q	H	L	W	E	H	Y	T	F	G	E	D	E	A	Y	L	R	D	T	A	Y	P	I	X	K	E	A	A	L	F	C	L	D	W	L	I	E	N	E	A	G	Y	L	V	T	S	P	S	T	S	P	E	Q	R	F	R	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																										T																				T	T	S					S	S	B		B	T	T	B					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		V	E	T	A	K	H	S	G	R	P	P	N	E	V	Y	R	D	L	R	A	G	A	A	S	G	W	D	Y	S	S	R	W	L	R	D	T	G	R	L	A	S	I	R	T	T	Q	F	I	P	I	D	L	N	A	F	L	F	K	L	E	S	A	I	A	N	I	S	A	L	K	G	.	E	K	E	T	E	A	L	F
Query Conservation																																																																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	G	Y	A	V	S	S	A	T	T	X	D	L	S	L	I	A	E	C	F	D	N	C	I	Q	A	A	K	R	L	S	I	D	E	D	F	V	K	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T						B	S																								T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																									513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.			.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.						.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																										.	.																									.	.	.	.	.
Query SS confidence																										.	.																									.	.	.	.	.
Query Sequence		R	Q	K	A	S	A	R	R	D	A	V	N	R	Y	L	W	D	D	E	N	G	I	Y	R	.	.	D	Y	D	W	R	R	E	Q	L	A	L	F	S	A	A	A	I	V	P	L	Y	V	G	M	.	.	.	.	.	A	N	H	E	Q	A	D	R	L	A	N	A	V	R	S	R	L	L	T	P	G	G	I	L	A
Query Conservation																										.	.																									.	.	.	.	.
Alig confidence											.	.	.	.	.											.	.																									.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.
Template Sequence		S	D	A	K	Q	R	L	L	P	.	.	.	.	.	L	Q	I	G	K	R	G	Q	L	Q	E	W	S	N	D	F	E	D	E	D	V	H	H	R	H	V	S	H	L	V	G	I	Y	P	G	R	L	I	T	E	Q	S	A	P	N	L	F	E	A	A	K	T	S	L	E	I	R	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								B			.	.	.	.	.			B		T	T	S	S	B		S	S	S	S					S		T	T		S			G	G	G	T	T	T	T	T			S			T	T	T																.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		554	.	.	.	.	.	560	.	.						.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	Y	E	T	G	E	Q	W	D	K	P	N	G	W	A	P	L	Q	W	M	A	I	Q	G	F	K	M	Y	G	D	D	L	L	G	D	E	I	A	R	S	W	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.						.													.	.
Template Conservation		.	.	.	.	.	.	.						.													.	.
Template Sequence		.	.	.	.	.	.	.	G	D	E	G	T	.	G	W	S	L	G	W	K	I	S	L	W	A	.	.	R	F	K	D	G	N	R	C	E	R	L	L	S	N	X	L
Template Known Secondary structure		.	.	.	.	.	.	.		S				.													.	.		T	T													S
Template Predicted Secondary structure		.	.	.	.	.	.	.						.													.	.
Template SS confidence
									620	.	.	.	.		.	.	.	.	.	630	.	.	.	.	.	.			.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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