Job Description P62601 Confidence 99.90% Date Thu Jan 5 12:07:39 GMT 2012 Rank 6 Aligned Residues 296 % Identity 17% Template c2okxB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:rhamnosidase b; PDBTitle: crystal structure of gh78 family rhamnosidase of bacillus sp. gl1 at2 1.9 a Resolution 1.90 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.
Predicted Secondary structure																			.																																						.	.														.	.
Query SS confidence																			.																																						.	.														.	.
Query Sequence		R	F	S	E	T	Y	Y	W	D	S	Y	F	T	M	L	G	L	.	A	E	S	G	R	E	D	L	L	K	C	M	A	D	N	F	A	W	M	I	E	N	Y	G	H	I	P	N	G	N	R	T	Y	Y	L	S	R	.	.	S	Q	P	P	V	F	A	L	M	V	E	L	F	.	.	E	E	D	G	V	R	G	A
Query Conservation																			.																																						.	.														.	.
Alig confidence																			.																																						.	.														.	.
Template Conservation
Template Sequence		Y	E	Q	V	F	W	V	G	D	S	R	N	E	A	L	V	N	Y	Y	V	F	G	E	T	E	I	V	E	R	C	L	N	L	V	P	G	S	A	D	E	T	P	L	Y	L	D	Q	V	P	S	A	W	S	S	V	I	P	N	W	T	F	F	W	I	L	A	C	R	E	Y	A	A	H	T	G	N	E	A	F	A
Template Known Secondary structure		T	T				B															T													G	G	G	G	T	T	T		T	T			S	B	S	S		S																								T
Template Predicted Secondary structure
Template SS confidence
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	Y	L	D	H	L	K	M	E	Y	A	F	W	M	D	G	A	E	S	L	I	P	N	Q	A	Y	R	H	V	V	R	M	P	D	G	S	L	L	N	R	Y	W	D	D	R	D	T	P	R	D	E	S	W	L	E	D	V	E	T	A	K	H	S	G	R	P	P	N	E	V	Y	R	D	L	R	A	G	A	A
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	I	W	P	A	V	K	H	T	L	T	H	Y	L	E	H	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Template Known Secondary structure																	T	T	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		651	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.																																																													670
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	W	D	Y	S	S	R	W	L	R	D	T	G	R	L	A	S	I	R	T	T	Q	F	I	P	I	D	L	N	A	F	L	F	K	L	E	S	A	I	A	N	I	S	A	L	K	G	E	K	E	T	E	A	L	F	R	Q	K	A	S	A	R	R	D	A	V	N	R	Y	L	W	D	D	E	N	G	I	Y	R
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		S	G	L	L	N	M	A	G	W	N	L	L	.	D	W	A	P	I	D	Q	P	N	E	G	I	V	T	H	Q	N	L	F	L	V	K	A	L	R	D	S	R	A	L	A	A	A	A	G	A	T	E	E	A	D	A	F	A	A	R	A	D	L	L	A	E	T	I	N	A	V	L	W	D	E	E	K	R	A	Y	I
Template Known Secondary structure		T	S	S	B				S					.		S	S	S					S																										T		G	G	G	G																		S			T	T	T	T
Template Predicted Secondary structure														.
Template SS confidence
		671	.	.	.	.	.	.	.	.	680	.	.		.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.
		403	.	.	.	.	.	.	410	.	.	.	.	.			.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		D	Y	D	W	R	R	E	Q	L	A	L	F	S	.	.	A	A	A	I	V	P	L	Y	V	G	M	A	N	H	E	Q	A	D	R	L	A	N	A	V	R	S	R	L	L	T	P	G	G	I	L	A	S	E	Y	E	T	G	E	Q	W	D	K	P	N	G	W	A	P	L	Q	W	M	A	I	Q	G	F	K	M	Y
Query Conservation															.	.
Alig confidence															.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	C	I	H	A	D	G	R	R	S	D	V	Y	S	M	Q	T	Q	V	V	A	Y	L	C	G	V	A	Q	G	E	R	E	A	V	I	E	G	Y	L	S	S	P	P	P	A	F	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	S	P	F	M	S	F	F	Y	Y	E	A	L	E	K	A
Template Known Secondary structure		S				T	T	S		B					B										T	T		S		T												S			T	T	S	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S														T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.																.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.
		481	.	.	.	.	.	.	.	.	490	.	.		.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		G	D	D	L	L	G	D	E	I	A	R	S	.	W	L	K	T	V	N	Q	F	Y	L	E	Q	H	K	L	I	E	K	Y	H	I	A	D	G	V	P	R	E	G	G	G	G	E	Y	P	L	Q	D	G	F	G	W	T	N	G	V	V	R	R	L	I	G
Query Conservation														.
Alig confidence														.									.	.	.													.	.
Template Conservation																							.	.	.													.	.
Template Sequence		G	R	Q	T	L	M	L	D	D	I	R	R	N	Y	G	Q	M	L	R	Y	D	.	.	.	A	T	T	C	W	E	M	Y	P	N	F	A	.	.	E	N	R	S	N	P	D	M	L	T	R	S	H	C	H	A	W	S	A	A	P	G	Y	F	L	G	S
Template Known Secondary structure		T													T						T	T	.	.	.		S	S			S	S		S	S			.	.	T	T	S	S	S	T	T	S	S		S		S			G	G	G		T
Template Predicted Secondary structure																							.	.	.													.	.
Template SS confidence
		815	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.				.	.	.	.	840	.	.	.	.	.	.	.			.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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