Job Description P62601 Confidence 99.84% Date Thu Jan 5 12:07:39 GMT 2012 Rank 10 Aligned Residues 286 % Identity 15% Template c2cqtA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cellobiose phosphorylase; PDBTitle: crystal structure of cellvibrio gilvus cellobiose phosphorylase2 crystallized from sodium/potassium phosphate Resolution 2.10 Å

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.										.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	Y	I	V	P	G	G	R	F	S	E	T	Y	Y	W	D	S	Y	F	T	M	L	G	L	A	E	S	G	R	E	D	L	L	K	C	M	A	D	N	F	A	W	M	I	E	N	Y	G	H	I	P	N	.	.	.	.	.	.	.	.	.	G	N	R	T	Y	Y	L	S	R	S	Q	P	P	V	F	A	L	M
Query Conservation																																																							.	.	.	.	.	.	.	.	.
Alig confidence																															.																								.	.	.	.	.	.	.	.	.
Template Conservation																															.
Template Sequence		S	A	S	F	F	E	T	G	I	G	R	G	M	G	F	R	D	S	N	Q	D	L	L	G	F	V	H	L	I	.	P	E	R	A	R	E	R	I	I	D	I	A	S	T	Q	F	A	D	G	S	A	Y	H	Q	Y	Q	P	L	T	K	R	G	N	N	D	I	G	S	G	F	N	D	D	P	L	W	L	I	A	G
Template Known Secondary structure		S	B	S	S	S	S	B	S	S	S														T	T	T	T	T		.													T	T	B		T	T	S		B		S				T	T	T	T					T	T		S		B	T	T
Template Predicted Secondary structure																															.
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
		231	.	.	.			.	.	.	.	.	240	.	.	.	.														.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure						.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	E	L	F	.	.	E	E	D	G	V	R	G	A	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	D	H	L	K	M	E	Y	A	F	W	M	D	G	A	E	S	L	I	P	N	Q	A	Y	R	H	V	V	R	M	P	D	G	S	L	L	N	R	Y	W	D	D	R	D	T	P	R	D	E	S
Query Conservation						.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.											.	.	.	.	.	.	.	.	.	.	.	.	.																			.																							.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.																							.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	A	Y	I	K	E	S	G	D	W	G	I	L	D	E	P	V	P	F	D	N	E	P	G	S	E	V	P	L	F	E	H	L	T	R	S	F	Q	F	T	V	Q	N	R	G	P	.	H	G	L	P	L	I	G	R	A	D	W	N	D	C	L	N	L	N	C	F	S	T	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												G	G	G	G	G	S				S	T	T		T	T																		T		B		T	.	T	S	S	B	B		B	T		S	S	S	T	T			T	T					.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.		.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	E	D	V	E	T	A	K	H	S	G	R	P	P	N	E	V	Y	R	D	L	R	A	G	A	A	S	G	W	D	Y	S	S	R	W	L	R	D	T	G	R	L	A	S	I	R	T	T	Q	F	I	P	I	D	L	N	A	F	L	F	K	L	E	S	A	I	A	N	I	S	A	L	K	G	E	K	E	T	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	G	E	S	F	Q	T	T	E	N	Q	A	G	G	V	A	E	S	.	.	.	.	.	.	.	.	V	F	I	A	A	Q	F	V	L	Y	G	A	E	Y	A	T	L	A	E	R	R	G	L	A	D	V	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S		T	T	T	S				S							.	.	.	.	.	.	.	.																					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template SS confidence
																												500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.									.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.								.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430								.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure																																.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query Sequence		A	L	F	R	Q	K	A	S	A	R	R	D	A	V	N	R	Y	L	W	D	D	E	N	G	I	Y	R	D	Y	D	.	.	.	.	.	.	.	W	R	R	E	Q	L	A	L	F	S	A	A	A	I	V	P	L	Y	V	G	M	A	N	H	E	.	.	.	.	.	.	.	Q	A	D	R	L	A	N	A	V	R	S
Query Conservation																																.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	E	A	R	K	Y	V	D	E	V	R	A	A	V	L	E	H	G	W	D	G	Q	W	F	L	R	A	Y	D	Y	Y	G	N	P	V	G	T	D	A	K	P	E	G	K	I	W	I	E	P	Q	G	F	A	V	M	A	G	I	G	V	G	E	G	P	D	D	A	D	A	P	A	V	K	A	L	D	S	V	N	E
Template Known Secondary structure																			S	B		S	S	S	B						T	T	S				S		T	T	S	S	S	S													T	T	T	T			S		T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
		442	.	.	.	.	.	.	.	450																.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	L	T	P	G	G	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	E	Y	E	T	G	E	Q	W	D	K	P	N	G	W	A	P	L	Q	W	M	A	I	Q	G	F	K	M	Y	G	D	D	L	L	G	D	E	I	A	R	S
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																						.
Template Sequence		M	L	G	T	P	H	G	L	V	L	Q	Y	P	A	Y	T	T	Y	Q	I	E	L	G	E	V	S	T	Y	P	P	G	Y	K	E	N	G	.	G	I	F	C	H	N	N	P	W	V	I	I	A	E	T	V	V	G	R	G	A	Q	A	F	D	Y	Y	K	R
Template Known Secondary structure						T	T				S			S			S	S			T	T	T	T	T	G	G	G	S		T	T	B	T	T	B	T	.	S			G	G	G												T
Template Predicted Secondary structure																																						.
Template SS confidence
		626	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.		.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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