Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFG0
Confidence7.18%DateThu Jan 5 11:26:08 GMT 2012
Rank100Aligned Residues36
% Identity28%Templated1q46a2
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution2.86

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120.........130.........140.........150.........160..
Predicted Secondary structure 


























Query SS confidence 













































Query Sequence  QVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSV
Query Conservation                
  


  


 
  
 
  
      
 
 
Alig confidence 


















..........
















Template Conservation 
            

  
 .......... 


 

    

 

 
Template Sequence  SRRRIRSIQKLIRVGKNDV. . . . . . . . . . AVVLRVDKEKGYIDLSK
Template Known Secondary structure 
SS

SSGGGTS
TT
..........TTTTS
Template Predicted Secondary structure 










..........



Template SS confidence 













































   51........60......... 70.........80......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions