Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFG0
Confidence99.52%DateThu Jan 5 11:26:08 GMT 2012
Rank11Aligned Residues57
% Identity63%Templated1nppa2
SCOP infoSH3-like barrel Translation proteins SH3-like domain N-utilization substance G protein NusG, C-terminal domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160.........170.........180
Predicted Secondary structure 

























Query SS confidence 
























































Query Sequence  PKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEK
Query Conservation         
  


  


 
  
 
  
      
 
 
 
 
    
 
    
 
Alig confidence 
























































Template Conservation      
 


 
 
  


 
  
 
  
   
 

 
 
 



 
 


    


Template Sequence  SKVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEK
Template Known Secondary structure 


S

TT

SSTTTT
GGGTTTGGG
Template Predicted Secondary structure 

























Template SS confidence 
























































   191........200.........210.........220.........230.........240.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions