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Job Description | P0AFG0 | Confidence | 8.12% | Date | Thu Jan 5 11:26:08 GMT 2012 |
Rank | 96 | Aligned Residues | 50 |
% Identity | 24% | Template | d1hmja_ |
SCOP info | RPB5-like RNA polymerase subunit
| RPB5-like RNA polymerase subunit
| RPB5
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Resolution | UNK |
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102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | I | S | D | K | E | V | D | A | I | M | N | R | L | Q | Q | V | G | D | K | P | R | P | . |
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K | T | L | F | E | P | G | E | M | V | R | V | N | . |
D | G | P | F | A | D | F | N | G | V | V | E | E | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | V | P | K | E | E | V | E | E | I | L | K | R | Y | N | I | K | I | Q | Q | L | P | K | I | Y | E | D | D | P | V | I | Q | E | I | G | A | K | E | G | D | V | V | R | V | I | R | K | S | P | T | A | G | V | S | I | A | Y | R | L | V |
Template Known Secondary structure |   |
 | T | T |  |  |  |  |  |  |  |  |  |  |  | T | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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