Job Description P0AFG0 Confidence 98.34% Date Thu Jan 5 11:26:08 GMT 2012 Rank 12 Aligned Residues 78 % Identity 23% Template c3ewgA_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcription antitermination protein nusg; PDBTitle: crystal structure of the n-terminal domain of nusg (ngn) from2 methanocaldococcus jannaschii Resolution 2.04 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	V	Q	A	F	S	G	F	E	G	R	V	A	T	S	L	R	E	H	I	K	L	H	N	M	E	D	L	F	G	E	V	M	V	P	T	E	E	V	V	E	I	R	G	G	Q	R	R	K	S	E	R	K	F	F	P	G	Y	V	L	V	Q	M	V	M	N	D	A	S	W	H	L	V	R	S	V	P	R	V
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	V	R	T	M	V	G	Q	E	K	N	I	A	G	L	M	A	S	R	A	E	K	E	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	Y	S	I	L	A	S	E	S	L	K	G	Y	V	L	V	E	A	E	T	K	G	D	V	E	E	L	I	K	G	M	P	R	V
Template Known Secondary structure								T	T																T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	S	T	T							S										T	T		T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.																				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	F	I	G	G	T	S	D	R	P	A	P	I	S	D	K	E	V	D	A	I	M
Query Conservation
Alig confidence								.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.
Template Sequence		R	G	I	V	P	G	.	.	.	.	.	.	T	I	A	I	E	E	I	E	P	L	L
Template Known Secondary structure						S	S	.	.	.	.	.	.				G	G	G	T	T	T	T
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.							70	.	.	.	.	.	.	.	.	.	80

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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