Job Description P0AFG0 Confidence 15.12% Date Thu Jan 5 11:26:08 GMT 2012 Rank 71 Aligned Residues 53 % Identity 13% Template c2zkrq_ PDB info PDB header:ribosomal protein/rna Chain: Q: PDB Molecule:rna expansion segment es31 part ii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		127	.	.	130	.	.	.	.	.	.	.											.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Query Sequence		L	F	E	P	G	E	M	V	R	V	N	.	.	.	.	.	.	.	.	.	.	D	G	P	F	A	D	F	N	G	V	V	E	E	V	D	Y	E	K	S	R	L	K	V	S	V	S	I	F	G	R	.	.	.	.	A	T	P	V	E	L	D	F	S	Q	V	E	K	A
Query Conservation													.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.															.	.															.	.	.	.
Template Conservation																																					.	.
Template Sequence		I	Y	K	K	G	D	I	V	D	I	K	G	M	G	T	V	Q	K	G	M	P	H	K	C	Y	H	G	K	T	G	R	V	Y	N	V	.	.	T	Q	H	A	V	G	I	I	V	N	K	Q	V	K	G	K	I	L	A	K	R	I	N	V	R	I	E	H	I	K	H	S
Template Known Secondary structure					T	T									T	T			S	S				G	G	G	T	T									.	.		S	S	S										S	S			S								G	G	G
Template Predicted Secondary structure																																					.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions