Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFG0
Confidence99.57%DateThu Jan 5 11:26:08 GMT 2012
Rank10Aligned Residues59
% Identity100%Templatec2kvqG_
PDB info PDB header:transcriptionChain: G: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of nuse:nusg-ctd complex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   123......130.........140.........150.........160.........170.........180.
Predicted Secondary structure 



























Query SS confidence 


























































Query Sequence  RPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEKA
Query Conservation          
  


  


 
  
 
  
      
 
 
 
 
    
 
    
 

Alig confidence 


























































Template Conservation 

   
  

 
 
  


 
  
 
  
   
 

 
 
  


 
 


    



Template Sequence  RPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEKA
Template Known Secondary structure 






TT
SSTTTTTTTTTT
TTT
Template Predicted Secondary structure 



























Template SS confidence 


























































   123......130.........140.........150.........160.........170.........180.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions