Return to main results Retrieve Phyre Job Id

Job DescriptionP37051
Confidence20.46%DateThu Jan 5 11:54:42 GMT 2012
Rank311Aligned Residues76
% Identity13%Templated1zpda3
SCOP infoThiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module
Resolution1.86

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   82.......90...... ...100.........110.........120. ........130
Predicted Secondary structure 







...








............................

Query SS confidence 














. . .
























. . . . . . . . . . . . . . . . . . . . . . . . . . . .








Query Sequence  AGRRRIVILVTKEAH. . . CLGDLLMKANYGGLDVEIAAVIGNH. . . . . . . . . . . . . . . . . . . . . . . . . . . . DTLRSLVER
Query Conservation      







 
 ... 
  

     
 
  

  



 ............................      
  
Alig confidence 














...










...










............................








Template Conservation 
     

 
 


 
     

 

   ...  
   

 

                                  
  
Template Sequence  GAPERRNILMVGDGSFQLTAQEVAQMVRL. . . KLPVIIFLINNYGYTIEVMIHDGPYNNIKNWDYAGLMEVFNGNGGYDS
Template Known Secondary structure 
TTSGGGT...T



SS
TTS

GGG






TTSSS
Template Predicted Secondary structure 








...






















Template SS confidence 















































































   428.430.........440.........450...... ...460.........470.........480.........490.........500....
 
   131........140.........150......... 160....
Predicted Secondary structure 











.


Query SS confidence 




























.




Query Sequence  FDIPFELVSHEGLTRNEHDQKMADAIDAY. QPDYV
Query Conservation   


   
      
   
  
   
   .  


Alig confidence 








....















.




Template Conservation   
     
 ....   

  

  
     

 

Template Sequence  GAAKGLKAK. . . . TGGELAEAIKVALANTDGPTLI
Template Known Secondary structure 


S....B

SS
Template Predicted Secondary structure 




....





Template SS confidence 


































   505....510... ......520.........530.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions