 |
Job Description | P37051 | Confidence | 39.07% | Date | Thu Jan 5 11:54:42 GMT 2012 |
Rank | 194 | Aligned Residues | 83 |
% Identity | 8% | Template | d1ovma3 |
SCOP info | Thiamin diphosphate-binding fold (THDP-binding)
| Thiamin diphosphate-binding fold (THDP-binding)
| Pyruvate oxidase and decarboxylase PP module
|
Resolution | 2.65 |
|
 |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | R | R | R | I | V | I | L | V | T | K | E | A | H | C | L | G | D | L | L | M | K | A | N | Y | G | G | L | D | V | E | I | A | A | V | I | G | N | H | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | L | R | S | L | V | E | R | F | D | I | P | F | E | L | V | S | H |
Query Conservation |   |
  |   |   |   |
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |
|
|   |   |   |
|
|
|   |
|   |   |   |   |   |
|
|   |
|
|   |
|   |   |
|
|   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
A | C | P | N | R | R | V | I | V | L | T | G | D | G | A | A | Q | L | T | I | Q | E | L | G | S | M | L | R | D | K | Q | H | P | I | I | L | V | L | N | N | E | G | Y | T | V | E | R | A | I | H | G | A | E | Q | R | Y | N | D | I | A | L | W | N | W | T | H | I | P | Q | A | L | S | L | D | P | Q | S | E | C | W |
Template Known Secondary structure |   |
 |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  | S | S | S |
|  |  |  |  |  |  | S |
| T | T |
| G | G | G |
|
|
|
|
|
| G | G | G | S | T | T | T | S |
| S | S |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
423 | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . |
  |
  |   |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | L | T | R | N | E | H | D | Q | K | M | A | D | A | I | D | A | Y | Q | P | D | Y | V |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|
|   |
|
|
Template Sequence |   |
R | V | S | E | A | E | Q | L | A | D | V | L | E | K | V | A | H | H | E | R | L | S | L | I |
Template Known Secondary structure |   |
 |  |
| B |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
503 | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|